Detailed Information for Phage Thespis |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | David Bushhouse |
Year Found | 2016 |
Location Found | Hampden-Sydney, VA USA |
Finding Institution | Hampden-Sydney College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 29°C |
GPS Coordinates | 37.2411 N, 78.4641 W Map |
Discovery Notes | Found in moist loam at the base of an American Beech in central Virginia. |
Naming Notes | Thespis was the first true actor, so this name gives a nod to both acting and the International Thespian Society. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 26, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1298 |
Genome length (bp) | 47618 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | CCTGCCGCCCCGA |
GC Content | 67.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | P |
Subcluster | P1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 78 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MG198785 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
45 |
Pitt Freezer Box Grid# |
A11 |
Available Files |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |