Mycobacterium phage HUHilltop
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Detailed Information for Phage HUHilltop
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlana C. Jones and Jelissa Jackson
Year Found2012
Location FoundWashington, DC USA
Finding InstitutionHoward University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.855556 N, 77.021944 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 12, 2013
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454
Approximate Shotgun Coverage180
Sanger Finishing Reactions11
Genome length (bp)46896
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceCCCGCCCCCCGA
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterP
SubclusterP1
Cluster Life CycleTemperate
Other Cluster Members

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Arib1 (P1)

Atcoo (P1)

Bartholomew (P1)

Bogie (P1)

Brusacoram (P1)

Bunnies (P1)

CactusJack (P1)

Camster (P1)

Donovan (P1)

Dynamo (P1)

FirstPlacePfu (P1)

Fishburne (P1)

Glaske (P1)

GreaseLightnin (P1)

HUHilltop (P1)

Jebeks (P1)

Jung (P1)

Juniormint (P1)

Kari (P1)

KilKor (P1)

Ksquared (P1)

Langerak (P1)

Majeke (P1)

Malithi (P1)

Mangethe (P1)

Megiddo (P1)

Necropolis (P1)

Phalm (P1)

Phegasus (P1)

Phineas (P1)

Polkaroo (P1)

Pygmy (P1)

Shipwreck (P1)

Sonah (P1)

StevieRay (P1)

StressBall (P1)

Techage (P1)

Thespis (P1)

Venti (P1)

Vidya (P1)

Willsammy (P1)

Zilizebeth (P1)

Tortellini (P2)

Xavia (P3)

BigNuz (P4)

Nazo (P4)

Phayonce (P5)

ThulaThula (P5)

Purky (P6)
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes81
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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HUHilltop_1
(terminase small subunit)

HUHilltop_2
(terminase large subunit)

HUHilltop_3
(portal protein)

HUHilltop_4
(capsid maturation protease)

HUHilltop_5
(scaffolding protein)

HUHilltop_6
(major capsid protein)

HUHilltop_7

HUHilltop_8
(head-to-tail adaptor)

HUHilltop_9
(head-to-tail stopper)

HUHilltop_10

HUHilltop_11

HUHilltop_12

HUHilltop_13
(tail terminator)

HUHilltop_14
(major tail protein)

HUHilltop_15
(tail assembly chaperone)

HUHilltop_16
(tail assembly chaperone)

HUHilltop_17
(tape measure protein)

HUHilltop_18
(minor tail protein)

HUHilltop_19
(minor tail protein)

HUHilltop_20
(minor tail protein)

HUHilltop_21
(minor tail protein)

HUHilltop_22
(minor tail protein)

HUHilltop_23

HUHilltop_24

HUHilltop_25

HUHilltop_26
(lysin A)

HUHilltop_27
(lysin B)

HUHilltop_28

HUHilltop_29

HUHilltop_30
(tyrosine integrase)

HUHilltop_31
(immunity repressor)

HUHilltop_32
(excise)

HUHilltop_33

HUHilltop_34
(antirepressor)

HUHilltop_35

HUHilltop_36

HUHilltop_37

HUHilltop_38

HUHilltop_39

HUHilltop_40

HUHilltop_41

HUHilltop_42

HUHilltop_43

HUHilltop_44

HUHilltop_45
(HNH endonuclease)

HUHilltop_46

HUHilltop_47
(RecB-like exonuclease/helicase)

HUHilltop_48
(RecT-like DNA pairing protein)

HUHilltop_49

HUHilltop_50

HUHilltop_51
(FtsK-like DNA translocase)

HUHilltop_52
(RusA-like resolvase)

HUHilltop_53

HUHilltop_54

HUHilltop_55
(DNA methylase)

HUHilltop_56

HUHilltop_57

HUHilltop_58
(DNA methylase)

HUHilltop_59

HUHilltop_60
(helix-turn-helix DNA binding domain protein)

HUHilltop_61

HUHilltop_62

HUHilltop_63

HUHilltop_64

HUHilltop_65

HUHilltop_66

HUHilltop_67

HUHilltop_68
(helix-turn-helix DNA binding protein)

HUHilltop_69

HUHilltop_70

HUHilltop_71

HUHilltop_72

HUHilltop_73

HUHilltop_74

HUHilltop_75

HUHilltop_76
(ribbon-helix-helix DNA binding domain protein)

HUHilltop_77

HUHilltop_78

HUHilltop_79

HUHilltop_80

HUHilltop_81
(HNH endonuclease)
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN010757
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 44
Pitt Freezer Box Grid# B11
Available Files
GenBank File for PhameratorDownload