Detailed Information for Phage StressBall |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Cameron Hartzler and Raul Martinez |
Year Found | 2018 |
Location Found | Longview, TX USA |
Finding Institution | LeTourneau University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 32.464719 N, 94.727251 W Map |
Discovery Notes | We collected our phage at 9:17 am on 9/27/18. The weather was 62 degrees Fahrenheit and cloudy. The soil was a dark brown color and was originally covered with compositing leaves. We dug in the flower bed behind our science building right next to a patch of monkey grass. We made sure that the hole was about 2 inches deep. |
Naming Notes | For the first 7 weeks of our adventure, we had no progress whatsoever. Even after we found our phage, one of us (Cameron) still experienced more-than-normal stress levels. He used a stress ball to try and calm his nerves, so we decided to name our phage just that. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 591 |
Genome length (bp) | 47915 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | CCTGCCGCCCCGA |
GC Content | 67.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | P |
Subcluster | P1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | LeTourneau University |
Annotation Status | In GenBank |
Plaque Notes | The average plaque diameter after 5 days of incubation at 37 degrees Celsius is 2.2 mm. The plaques are almost circular, but they have a jagged edge at one end of them. |
Morphotype | Siphoviridae |
Number of Genes | 78 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN908683 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
85 |
Pitt Freezer Box Grid# |
D3 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |