Mycobacterium phage Phlegm
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Detailed Information for Phage Phlegm
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJustin Cicarelli
Year Found2017
Location FoundPhiladelphia, PA United States
Finding InstitutionDrexel University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates39.953976 N, 75.189064 W Map
Discovery NotesDate of sample collection: October 4th, 2017
Time of sample collection: 11:24am
Depth of soil dug: 1.5 inches
Approximate Temperature: 70 degrees Fahrenheit
General Location: Drexel Campus, side entrance of Papadakis Integrated Sciences Building
Sample Site Description: near foliage, dry medium-brown soil
Naming NotesI liked the name phlegm since it has a ph like there is in phage and thought it was funny.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 31, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage537
Genome length (bp)155959
Character of genome endsCircularly Permuted
GC Content64.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Doodle1 (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

JustHall (C1)

Kamryn (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Lionheart (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Megamind (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

MrsHay (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

OaklaforG (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

SandySandal (C1)

Sauce (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Annotation StatusBeing Annotated (Expected completion by 6/8/2018)
Plaque NotesTiter: 1.5 x 10^10 pfu/ml
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Phlegm_1

Phlegm_2

Phlegm_3

Phlegm_4

Phlegm_5

Phlegm_6

Phlegm_7

Phlegm_8

Phlegm_9

Phlegm_10

Phlegm_11

Phlegm_12

Phlegm_13

Phlegm_14

Phlegm_15

Phlegm_16

Phlegm_17

Phlegm_18

Phlegm_19

Phlegm_20

Phlegm_21

Phlegm_22

Phlegm_23

Phlegm_24

Phlegm_25

Phlegm_26

Phlegm_27

Phlegm_28

Phlegm_29

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Phlegm_31

Phlegm_32

Phlegm_33

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Phlegm_37

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Phlegm_41

Phlegm_42

Phlegm_43

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Phlegm_48

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Phlegm_59

Phlegm_60

Phlegm_61

Phlegm_62

Phlegm_63

Phlegm_64

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Phlegm_66

Phlegm_67

Phlegm_68

Phlegm_69

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Phlegm_71

Phlegm_72

Phlegm_73

Phlegm_74

Phlegm_75

Phlegm_76

Phlegm_77

Phlegm_78

Phlegm_79

Phlegm_80

Phlegm_81

Phlegm_86

Phlegm_87

Phlegm_88

Phlegm_89

Phlegm_90

Phlegm_91

Phlegm_92

Phlegm_93

Phlegm_94

Phlegm_95

Phlegm_96

Phlegm_97

Phlegm_98

Phlegm_99

Phlegm_100

Phlegm_101

Phlegm_102

Phlegm_103

Phlegm_104

Phlegm_105

Phlegm_106

Phlegm_107

Phlegm_108

Phlegm_109

Phlegm_110

Phlegm_111

Phlegm_112

Phlegm_113

Phlegm_114

Phlegm_115

Phlegm_116

Phlegm_117

Phlegm_118

Phlegm_119

Phlegm_120

Phlegm_121

Phlegm_122

Phlegm_123

Phlegm_124

Phlegm_125

Phlegm_126

Phlegm_128

Phlegm_129

Phlegm_130

Phlegm_131

Phlegm_132

Phlegm_133

Phlegm_134

Phlegm_135

Phlegm_136

Phlegm_137

Phlegm_138

Phlegm_139

Phlegm_140

Phlegm_141

Phlegm_142

Phlegm_143

Phlegm_144

Phlegm_145

Phlegm_146

Phlegm_147

Phlegm_148

Phlegm_149

Phlegm_150

Phlegm_151

Phlegm_152

Phlegm_153

Phlegm_157

Phlegm_158

Phlegm_165

Phlegm_173

Phlegm_175

Phlegm_176

Phlegm_187

Phlegm_188

Phlegm_189

Phlegm_190

Phlegm_191

Phlegm_192

Phlegm_193

Phlegm_194

Phlegm_195

Phlegm_196

Phlegm_197

Phlegm_198

Phlegm_199

Phlegm_200

Phlegm_201

Phlegm_202

Phlegm_203

Phlegm_204

Phlegm_205

Phlegm_206

Phlegm_207

Phlegm_208

Phlegm_209

Phlegm_210

Phlegm_211

Phlegm_212

Phlegm_213

Phlegm_214

Phlegm_215

Phlegm_216

Phlegm_217

Phlegm_218

Phlegm_219

Phlegm_220

Phlegm_221

Phlegm_222

Phlegm_223

Phlegm_226

Phlegm_227

Phlegm_228

Phlegm_229

Phlegm_230

Phlegm_231

Phlegm_232

Phlegm_233

Phlegm_234

Phlegm_235

Phlegm_236

Phlegm_237

Phlegm_238

Phlegm_239

Phlegm_240

Phlegm_241

Phlegm_242

Phlegm_243

Phlegm_244

Phlegm_245

Phlegm_246

Phlegm_247

Phlegm_248

Phlegm_249

Phlegm_250

Phlegm_251

Phlegm_252

Phlegm_253

Phlegm_254

Phlegm_255

Phlegm_256

Phlegm_257

Phlegm_258

Phlegm_259

Phlegm_260

Phlegm_261

Phlegm_262

Phlegm_263

Phlegm_264

Phlegm_265

Phlegm_266

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 61
Pitt Freezer Box Grid# B8