Mycobacterium phage Rabinovish
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Detailed Information for Phage Rabinovish
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByVictoria Reed
Year Found2017
Location FoundMedia, PA United States
Finding InstitutionUniversity of the Sciences in Philadelphia
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.2503 N, 75.1666 W Map
Discovery Notes Soil sample was retrieved on the side of a house in a suburban area. Soil in contact with dogs and people.

Naming NotesThe soil came from my friend's backyard, so I named my phage after her.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 12, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage81
Genome length (bp)154861
Character of genome endsCircularly Permuted
GC Content64.7%
Sequencing NotesThis phage was sequenced as part of a mixed DOGEMS sample.
Fasta file available?Yes: Download fasta file
Characterization
ClusterC
SubclusterC1
Cluster Life CycleLytic
Other Cluster Members

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Boonesok (None)

CLach (None)

DavidMina (None)

DitchDweller (None)

Elpis (None)

Genet (None)

Hard2get (None)

Hippocrates (None)

Kali (None)

LittleSpot (None)

Lsquared (None)

Marlex (None)

Minipoke (None)

PeeWee (None)

Pesky7 (None)

Phomnie (None)

Phyllis (None)

Roku (None)

Sagamore (None)

Samarai (None)

ShenziUR (None)

TinyC (None)

Trilla23 (None)

Turret (None)

Squidney (A3)

Ading (C1)

Adlitam (C1)

Alice (C1)

Amataga (C1)

ArcherS7 (C1)

Astraea (C1)

Atlantean (C1)

Atlas (C1)

Audrick (C1)

Ava3 (C1)

BadAgartude (C1)

Bangla1971 (C1)

Basquiat (C1)

BeanWater (C1)

Bigswole (C1)

Bipolarisk (C1)

Bonray (C1)

Bread (C1)

Breeniome (C1)

Burrough (C1)

Bxz1 (C1)

Cali (C1)

Cane17 (C1)

Catera (C1)

Chargie21 (C1)

CharlieB (C1)

ChickenPhender (C1)

Colt (C1)

Daffodil (C1)

Dandelion (C1)

Darko (C1)

Delilah (C1)

Derek (C1)

Dietrick (C1)

Doodle1 (C1)

Drazdys (C1)

DrPhinkDaddy (C1)

DTDevon (C1)

EmmaElysia (C1)

EmToTheThree (C1)

Erdmann (C1)

ErnieJ (C1)

Essence (C1)

ET08 (C1)

Ewok (C1)

Exxus285 (C1)

Flabslab (C1)

Fludd (C1)

FoxtrotP1 (C1)

FrayBell (C1)

FudgeTart (C1)

Gabriel (C1)

Ghost (C1)

Gizmo (C1)

HarrySpotter (C1)

HyRo (C1)

InigoMontoya (C1)

InterFolia (C1)

Iota (C1)

Isee1101 (C1)

JennanaJr (C1)

JustHall (C1)

Kamryn (C1)

Khaleesi (C1)

Koguma (C1)

LifeSavor (C1)

LinStu (C1)

Lionheart (C1)

Littleton (C1)

Loanshark (C1)

LRRHood (C1)

Lukilu (C1)

Lysocool (C1)

Megamind (C1)

Melpomini (C1)

MePac (C1)

MikeLiesIn (C1)

Momo (C1)

MoMoMixon (C1)

Morizzled23 (C1)

MrsHay (C1)

Naija (C1)

Napoleon13 (C1)

Nappy (C1)

Nicolasphaqe (C1)

Nidhogg (C1)

NoodleTree (C1)

Norm (C1)

NuevoMundo (C1)

OaklaforG (C1)

ParkTD (C1)

Patch (C1)

Patter (C1)

Phlegm (C1)

Phox (C1)

Phusco (C1)

Pier (C1)

Pio (C1)

Pivoine (C1)

Pleione (C1)

QBert (C1)

Rabinovish (C1)

Rahel (C1)

Rizal (C1)

RoMag (C1)

Roots515 (C1)

Salacia (C1)

SandySandal (C1)

Sauce (C1)

ScottMcG (C1)

Sebastian (C1)

Sebata (C1)

ShankPowerGod (C1)

Shaqnato (C1)

Shelob (C1)

ShiaLabeouf (C1)

Shnickers (C1)

Shrimp (C1)

SmallFry (C1)

Specks (C1)

Sprinklers (C1)

Spud (C1)

Stubby (C1)

Teardrop (C1)

TheO (C1)

Thuathua (C1)

TinyTim (C1)

Tonenili (C1)

Tortoise16 (C1)

Tyke (C1)

ValleyTerrace (C1)

Wally (C1)

Willis (C1)

Yucca (C1)

Zalkecks (C1)

Zeenon (C1)

ZygoTaiga (C1)

Matcha (C2)

Myrna (C2)

Phabba (C2)

SimSimmers (C2)

SrishMeg2525 (C2)

Annotation StatusQC Complete
MorphotypeMyoviridae
Has been Phamerated?Yes
Gene List

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Rabinovish_1

Rabinovish_2

Rabinovish_3
(Nucleotidyl transferase)

Rabinovish_4

Rabinovish_5

Rabinovish_6

Rabinovish_7

Rabinovish_8

Rabinovish_9

Rabinovish_10

Rabinovish_11

Rabinovish_12

Rabinovish_13

Rabinovish_14

Rabinovish_15

Rabinovish_16

Rabinovish_17

Rabinovish_18

Rabinovish_19

Rabinovish_20

Rabinovish_21

Rabinovish_22

Rabinovish_23

Rabinovish_24

Rabinovish_25

Rabinovish_26

Rabinovish_27

Rabinovish_28
(Membrane protein, Band-7 like)

Rabinovish_29

Rabinovish_30

Rabinovish_31

Rabinovish_32

Rabinovish_33

Rabinovish_34

Rabinovish_35

Rabinovish_36

Rabinovish_37

Rabinovish_38

Rabinovish_39

Rabinovish_40

Rabinovish_41

Rabinovish_42

Rabinovish_43

Rabinovish_44

Rabinovish_45
(helix-turn-helix DNA binding domain)

Rabinovish_46

Rabinovish_47

Rabinovish_48

Rabinovish_49

Rabinovish_50

Rabinovish_51

Rabinovish_52

Rabinovish_53

Rabinovish_54

Rabinovish_55

Rabinovish_56

Rabinovish_57

Rabinovish_58

Rabinovish_59

Rabinovish_60

Rabinovish_61

Rabinovish_62
(Helix-Turn-Helix DNA Binding domain)

Rabinovish_63
(Helix-Turn-Helix DNA Binding Domain)

Rabinovish_64

Rabinovish_65

Rabinovish_66

Rabinovish_67

Rabinovish_68

Rabinovish_69

Rabinovish_70

Rabinovish_71

Rabinovish_72

Rabinovish_73

Rabinovish_74

Rabinovish_75

Rabinovish_76

Rabinovish_77

Rabinovish_78

Rabinovish_79

Rabinovish_80

Rabinovish_81
(HNH endonuclease)

Rabinovish_85

Rabinovish_86

Rabinovish_87
(Portal protein)

Rabinovish_88

Rabinovish_89

Rabinovish_90
(ThyX thymidylate synthase)

Rabinovish_91

Rabinovish_92
(RNA ligase)

Rabinovish_93
(Endolysin, LysM like)

Rabinovish_94

Rabinovish_95

Rabinovish_96
(Major Capsid protein)

Rabinovish_97

Rabinovish_98
(endonuclease)

Rabinovish_99

Rabinovish_100

Rabinovish_101

Rabinovish_102

Rabinovish_103

Rabinovish_104

Rabinovish_105

Rabinovish_106

Rabinovish_107

Rabinovish_108

Rabinovish_109

Rabinovish_110

Rabinovish_111

Rabinovish_112
(Capsid Decoration Protein)

Rabinovish_113

Rabinovish_114

Rabinovish_115

Rabinovish_116

Rabinovish_117

Rabinovish_118

Rabinovish_119

Rabinovish_120

Rabinovish_121

Rabinovish_122

Rabinovish_123

Rabinovish_124

Rabinovish_125
(Tail Sheath Protein)

Rabinovish_127

Rabinovish_128

Rabinovish_126

Rabinovish_129

Rabinovish_131
(Tape measure Protein)

Rabinovish_132

Rabinovish_133

Rabinovish_134

Rabinovish_135
(Minor tail protein)

Rabinovish_136

Rabinovish_137
(Minor Tail protien)

Rabinovish_138

Rabinovish_139
(baseplate J protein)

Rabinovish_140
(HNH endonuclease)

Rabinovish_141
(HNH endonuclease)

Rabinovish_142

Rabinovish_143

Rabinovish_144

Rabinovish_145
(minor tail protein)

Rabinovish_146

Rabinovish_147

Rabinovish_148

Rabinovish_149

Rabinovish_150

Rabinovish_151

Rabinovish_152

Rabinovish_156

Rabinovish_157
(peptidyl tRNA hydrolase)

Rabinovish_164

Rabinovish_168
(minor tail protein, D-ala-D-ala-carboxypeptidase)

Rabinovish_169

Rabinovish_181

Rabinovish_182
(DNA helicase)

Rabinovish_183

Rabinovish_184

Rabinovish_185

Rabinovish_186

Rabinovish_187

Rabinovish_188

Rabinovish_189

Rabinovish_190

Rabinovish_191

Rabinovish_192
(aminotransferase)

Rabinovish_193

Rabinovish_194

Rabinovish_195
(DnaC helicase loader)

Rabinovish_196
(DnaB dsDNA helicase)

Rabinovish_197

Rabinovish_198
(DNA primase/polymerase)

Rabinovish_199

Rabinovish_200
(Chaperonin, DnaJ-like)

Rabinovish_201

Rabinovish_202
(DnaE DNA polymerase III (alpha))

Rabinovish_203
(RF-1 peptide chain release factor)

Rabinovish_204
(RecA DNA recombinase)

Rabinovish_205

Rabinovish_206

Rabinovish_207
(exonuclease)

Rabinovish_208
(RusA resolvase)

Rabinovish_209

Rabinovish_210

Rabinovish_211

Rabinovish_212

Rabinovish_213

Rabinovish_214

Rabinovish_215

Rabinovish_218

Rabinovish_219

Rabinovish_220

Rabinovish_221

Rabinovish_222

Rabinovish_223

Rabinovish_224

Rabinovish_225

Rabinovish_226
(Ro RNA Binding Protein)

Rabinovish_227

Rabinovish_228

Rabinovish_229

Rabinovish_230

Rabinovish_231

Rabinovish_232

Rabinovish_233
(glycosyltransferase)

Rabinovish_234

Rabinovish_235
(glycosyltransferase)

Rabinovish_236
(galactosyltransferase)

Rabinovish_237

Rabinovish_238

Rabinovish_239

Rabinovish_240

Rabinovish_241

Rabinovish_242

Rabinovish_243
(Lysin A)

Rabinovish_244

Rabinovish_245
(Lysin B)

Rabinovish_246

Rabinovish_247

Rabinovish_248

Rabinovish_249

Rabinovish_250

Rabinovish_251
(Polynucleotide Kinase)

Rabinovish_252

Rabinovish_253
(serine/ threonine kinase)

Rabinovish_254
(endonuclease)

Rabinovish_255

Rabinovish_256

Rabinovish_257

Rabinovish_258

Rabinovish_259

Rabinovish_260

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 47
Pitt Freezer Box Grid# E1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload