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Mycobacterium phage Fionnbharth
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Detailed Information for Phage Fionnbharth
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByGarrett Brooks
Year Found2010
Location FoundLa Jolla, CA USA
Finding InstitutionUniversity of California, San Diego
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates32.885 N, 117.243 W Map
Discovery NotesFound in dark, moist soil with an abundance of rotting organic material. Taken in the morning on a hot day, about 29°C.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 8, 2011
Genome length (bp)58076
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGCGGCCAT
GC Content68.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK4
Other Cluster Members

Click to View

Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

Frankicide (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

Lazy (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Shrek (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Dalmuri (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

Lefty (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Humbert (K3)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

Mitti (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Cain (K6)

DarthP (K6)

Hammy (K6)

Krueger (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Plaque NotesPlaques are extremely turbid, of about 3mm diameter.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes94
Number of tRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Fionnbharth_1

Fionnbharth_2

Fionnbharth_3

Fionnbharth_4

Fionnbharth_5

Fionnbharth_6

Fionnbharth_7

Fionnbharth_8

Fionnbharth_9
(terminase)

Fionnbharth_10
(portal)

Fionnbharth_11
(capsid maturation protease)

Fionnbharth_12

Fionnbharth_13
(scaffolding)

Fionnbharth_14
(major capsid)

Fionnbharth_15

Fionnbharth_16

Fionnbharth_17

Fionnbharth_18

Fionnbharth_19
(major tail subunit)

Fionnbharth_20
(tail assembly chaperone)

Fionnbharth_21
(tail assembly chaperone)

Fionnbharth_22
(tapemeasure)

Fionnbharth_23
(minor tail)

Fionnbharth_24
(minor tail)

Fionnbharth_25

Fionnbharth_26
(minor tail)

Fionnbharth_27

Fionnbharth_28
(minor tail)

Fionnbharth_29

Fionnbharth_30

Fionnbharth_31
(Lysin A)

Fionnbharth_32
(Lysin B)

Fionnbharth_33
(holin)

Fionnbharth_34

Fionnbharth_35

Fionnbharth_36

Fionnbharth_37

Fionnbharth_39

Fionnbharth_40

Fionnbharth_41

Fionnbharth_42

Fionnbharth_43

Fionnbharth_44

Fionnbharth_45
(integrase, Y-int)

Fionnbharth_46

Fionnbharth_47
(immunity repressor)

Fionnbharth_48

Fionnbharth_49
(Xis)

Fionnbharth_50

Fionnbharth_51

Fionnbharth_52

Fionnbharth_53
(endonuclease)

Fionnbharth_54

Fionnbharth_55

Fionnbharth_56

Fionnbharth_57

Fionnbharth_58

Fionnbharth_59

Fionnbharth_60

Fionnbharth_61

Fionnbharth_62
(DNA polymerase)

Fionnbharth_63

Fionnbharth_64
(Exonuclease)

Fionnbharth_65

Fionnbharth_66

Fionnbharth_67

Fionnbharth_68

Fionnbharth_69

Fionnbharth_70
(NrdH-like glutaredoxin)

Fionnbharth_71
(DNA methylase)

Fionnbharth_72

Fionnbharth_73

Fionnbharth_74
(DNA primase)

Fionnbharth_75

Fionnbharth_76
(HNH endonuclease)

Fionnbharth_77

Fionnbharth_78

Fionnbharth_79

Fionnbharth_80

Fionnbharth_81

Fionnbharth_82

Fionnbharth_83

Fionnbharth_84

Fionnbharth_85

Fionnbharth_86

Fionnbharth_87
(pyrophosphatase)

Fionnbharth_88

Fionnbharth_89

Fionnbharth_90

Fionnbharth_91

Fionnbharth_92

Fionnbharth_93

Fionnbharth_94
(HNH endonuclease)

Fionnbharth_95
(methyltransferase)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionJN831653
Refseq NumberNC_027365
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload