Mycobacterium phage SamScheppers
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Detailed Information for Phage SamScheppers
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByElizabeth Hamilton
Year Found2013
Location FoundCanton, MO United States
Finding InstitutionCulver-Stockton College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.08 N, 91.51 W Map
Discovery NotesSoil Sample
damp
2 cm depth
32.2 degrees Celsius
Naming NotesNamed after my grandmother.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 27, 2014
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage633
Sanger Finishing Reactions6
Genome length (bp)58351
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGCGGCCAT
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK4
Cluster Life CycleTemperate
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

MaeVan (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Noonan (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Chris (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

Lefty (K1)

Lela18 (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mendoza (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TinkerBelle (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

BoostSeason (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Euphorie (K6)

Hammy (K6)

Krueger (K6)

Lazy (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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SamScheppers_1

SamScheppers_2

SamScheppers_3

SamScheppers_4

SamScheppers_5

SamScheppers_6

SamScheppers_7
(terminase)

SamScheppers_8
(portal protein)

SamScheppers_9
(capsid maturation protease)

SamScheppers_10

SamScheppers_11
(scaffolding protein)

SamScheppers_12
(major capsid protein)

SamScheppers_13

SamScheppers_14

SamScheppers_15

SamScheppers_16

SamScheppers_17
(major tail protein)

SamScheppers_18
(tail assembly chaperone)

SamScheppers_19
(tail assembly chaperone)

SamScheppers_20
(tape measure protein)

SamScheppers_21
(minor tail protein)

SamScheppers_22
(minor tail protein)

SamScheppers_23
(minor tail protein)

SamScheppers_24
(minor tail protein)

SamScheppers_25
(minor tail protein)

SamScheppers_26
(minor tail protein)

SamScheppers_27
(minor tail protein)

SamScheppers_28

SamScheppers_29

SamScheppers_30

SamScheppers_31
(lysin A)

SamScheppers_32
(lysin B)

SamScheppers_33
(holin)

SamScheppers_34

SamScheppers_35

SamScheppers_36

SamScheppers_37

SamScheppers_38

SamScheppers_39

SamScheppers_40

SamScheppers_41

SamScheppers_42

SamScheppers_43

SamScheppers_44
(integrase)

SamScheppers_45

SamScheppers_46
(immunity repressor)

SamScheppers_47

SamScheppers_48

SamScheppers_49

SamScheppers_50

SamScheppers_51
(endonuclease)

SamScheppers_52

SamScheppers_53

SamScheppers_54

SamScheppers_55

SamScheppers_56

SamScheppers_57

SamScheppers_58

SamScheppers_59

SamScheppers_60

SamScheppers_61

SamScheppers_62
(DnaQ-like exonuclease)

SamScheppers_63

SamScheppers_64

SamScheppers_65

SamScheppers_66

SamScheppers_67

SamScheppers_68

SamScheppers_69
(DNA methylase)

SamScheppers_70

SamScheppers_71

SamScheppers_72
(DNA primase)

SamScheppers_73

SamScheppers_74

SamScheppers_75
(endonuclease VII)

SamScheppers_76

SamScheppers_77

SamScheppers_78

SamScheppers_79

SamScheppers_80
(SprT-like protease)

SamScheppers_81

SamScheppers_82

SamScheppers_83

SamScheppers_84

SamScheppers_85

SamScheppers_86

SamScheppers_87

SamScheppers_88

SamScheppers_89

SamScheppers_90

SamScheppers_91

SamScheppers_92

SamScheppers_93
(HNH endonuclease)

SamScheppers_94
(methyltransferase)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH051258
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# H8
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload