Mycobacterium phage Rando14
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Detailed Information for Phage Rando14
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByRenee' Miller
Year Found2014
Location FoundNew Orleans , LA United States
Finding InstitutionXavier University of Louisiana
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates29.963564 N, 90.106258 W Map
Discovery NotesFound 1-2 inches in submerged soil.
Naming NotesPreviously thought to have random ("Rando") plaque morphology.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 14, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2179
Genome length (bp)59925
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGTGGCAT
GC Content64.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK5
Cluster Life CycleTemperate
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

MaeVan (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Noonan (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TrippyB (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Chris (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

Lefty (K1)

Lela18 (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mendoza (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TinkerBelle (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

BoostSeason (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Euphorie (K6)

Hammy (K6)

Krueger (K6)

Lazy (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotation StatusIn GenBank
Plaque NotesLarge plaques which are turbid with clear centers.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Rando14_1

Rando14_2

Rando14_3

Rando14_5
(terminase small subunit)

Rando14_6
(terminase large subunit)

Rando14_7
(portal protein)

Rando14_8
(capsid maturation protease)

Rando14_9

Rando14_10
(scaffolding protein)

Rando14_11
(major capsid protein)

Rando14_12

Rando14_13
(head-to-tail connector complex protein)

Rando14_14

Rando14_15
(head-to-tail connector complex protein)

Rando14_16
(major tail protein)

Rando14_17
(tail assembly chaperone)

Rando14_18
(tail assembly chaperone)

Rando14_19
(tape measure protein)

Rando14_20
(minor tail protein)

Rando14_21
(minor tail protein)

Rando14_22
(minor tail protein)

Rando14_23

Rando14_24
(minor tail protein)

Rando14_25

Rando14_26
(minor tail protein)

Rando14_27

Rando14_28

Rando14_29

Rando14_30
(lysin A)

Rando14_31
(lysin B)

Rando14_32
(holin)

Rando14_33

Rando14_34

Rando14_35

Rando14_36

Rando14_37

Rando14_38

Rando14_39

Rando14_40
(integrase)

Rando14_41

Rando14_42

Rando14_43
(immunity repressor)

Rando14_44

Rando14_45

Rando14_46

Rando14_47

Rando14_48

Rando14_49

Rando14_50

Rando14_51

Rando14_52

Rando14_53

Rando14_54

Rando14_55

Rando14_56

Rando14_57

Rando14_58

Rando14_59

Rando14_60

Rando14_61

Rando14_62
(NrdH-like glutaredoxin)

Rando14_63
(DNA methylase)

Rando14_64

Rando14_65

Rando14_66
(DNA primase/polymerase)

Rando14_67
(helicase)

Rando14_68
(holiday junction resolvase)

Rando14_69

Rando14_70

Rando14_71

Rando14_72

Rando14_73
(DNA methylase)

Rando14_74

Rando14_75

Rando14_76

Rando14_77

Rando14_78

Rando14_79

Rando14_80
(RtcB-like RNA ligase)

Rando14_81

Rando14_82

Rando14_83

Rando14_84

Rando14_85

Rando14_86

Rando14_87

Rando14_88

Rando14_89

Rando14_90

Rando14_91

Rando14_92
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH697592
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 8.1X10^8pfu/ml
Pitt Freezer Box# 7
Pitt Freezer Box Grid# F12
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload