Mycobacterium phage LeMond
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Detailed Information for Phage LeMond
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesDAJM, Sharkeisha
Found ByJack Murphy and David Ahern
Year Found2014
Location FoundSpokane, WA United States of America
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates47.665923 N, 117.403924 W Map
Discovery NotesSoil taken at the base of a willow tree, next to a swampy lake. Located at the base of a hill near Hughes Hall on Gonzaga's campus. Soil appeared to be dry. Some small rocks and dry grass in sample.
Naming Notesplease note this lysate was named "Sharkeisha" at the home institution and the students know it by that name. It was changed to LeMond later to satisfy PhagesDB naming rules.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 4, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage107
Genome length (bp)62515
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content68.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

MaeVan (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Noonan (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Chris (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

Lefty (K1)

Lela18 (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mendoza (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TinkerBelle (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

BoostSeason (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Euphorie (K6)

Hammy (K6)

Krueger (K6)

Lazy (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotation StatusIn GenBank
Plaque NotesPlaques appeared cloudy and turbid. Plaques had a diameter of 2.0-2.5 millimeters. All plaques had a halo of approximately 0.3 millimeters.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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LeMond_1

LeMond_2

LeMond_3

LeMond_5

LeMond_6
(terminase, small subunit)

LeMond_7
(terminase, large subunit)

LeMond_8
(portal protein)

LeMond_9
(capsid maturation protease)

LeMond_10

LeMond_11
(scaffolding protein)

LeMond_12
(major capsid protein)

LeMond_13
(head-to-tail connector protein)

LeMond_14
(head-to-tail connector protein)

LeMond_15
(head-to-tail connector protein)

LeMond_16
(head-to-tail connector protein)

LeMond_17
(major tail protein)

LeMond_18
(tail assembly chaperone)

LeMond_19
(tail assembly chaperone)

LeMond_20
(tape measure protein)

LeMond_21
(minor tail protein)

LeMond_22
(minor tail protein)

LeMond_23
(minor tail protein)

LeMond_24
(minor tail protein)

LeMond_25
(minor tail protein)

LeMond_26
(minor tail protein)

LeMond_27
(minor tail protein)

LeMond_28

LeMond_29
(lysin A)

LeMond_30
(lysin B)

LeMond_31
(holin)

LeMond_32

LeMond_33

LeMond_34

LeMond_35
(nuclease)

LeMond_36

LeMond_37
(helix-turn-helix DNA binding domain)

LeMond_38

LeMond_39

LeMond_40

LeMond_41

LeMond_42

LeMond_43

LeMond_44
(queuine tRNA-ribosyltransferase)

LeMond_45
(integrase, (Y-int))

LeMond_46
(membrane protein)

LeMond_47
(immunity repressor)

LeMond_48
(Cro (control of repressor))

LeMond_49
(excise)

LeMond_50

LeMond_51

LeMond_52

LeMond_53

LeMond_54
(helix-turn-helix DNA binding domain)

LeMond_55
(WhiB family transcription factor)

LeMond_56

LeMond_57

LeMond_58

LeMond_59

LeMond_60

LeMond_61
(DnaQ-like exonuclease (DNA polymerase III subunit))

LeMond_62

LeMond_63

LeMond_64
(exonuclease)

LeMond_65

LeMond_66

LeMond_67

LeMond_68

LeMond_69

LeMond_70
(NrdH glutaredoxin)

LeMond_71
(HNH endonuclease)

LeMond_72
(DNA primase/polymerase)

LeMond_73
(RusA-like resolvase (endonuclease))

LeMond_74

LeMond_75
(helix-turn-helix DNA binding domain)

LeMond_76

LeMond_77

LeMond_78
(SprT-like protease)

LeMond_79

LeMond_80

LeMond_81
(helix-turn-helix DNA binding domain)

LeMond_82

LeMond_83
(helix-turn-helix DNA binding domain)

LeMond_84

LeMond_85

LeMond_86
(rtcB-like RNA ligase)

LeMond_87

LeMond_88

LeMond_89

LeMond_90

LeMond_91

LeMond_92

LeMond_93

LeMond_94

LeMond_95
(antitoxin in toxin/antitoxin system, HicB-like)

LeMond_96
(toxin in toxin/antitoxin system, HicA-like)

LeMond_97
(esterase)

LeMond_98

LeMond_99

LeMond_100

LeMond_101

LeMond_102

LeMond_103
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH910038
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 16
Pitt Freezer Box Grid# G8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload