Mycobacterium phage Amohnition
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Detailed Information for Phage Amohnition
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByNana Yaa Amoh/SED
Year Found2015
Location FoundWilliamsburg, VA USA
Finding InstitutionCollege of William & Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates37.226173 N, 76.738815 W Map
Discovery NotesI found this in the woods behind the Sadler Center
Naming NotesMy last name is Amoh and it pronounced like the first syllable in the word ammunition
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 11, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1272
Genome length (bp)61761
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content67.2%
Sequencing NotesAt position 23583 bp 21% of read have an A rather than consensus C. At position 25624 bp 41% of reads have a T rather than consensus C.
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK6
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kahlo (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

Lazy (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Noonan (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Shrek (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

Lefty (K1)

Lela18 (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

Mendoza (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TinkerBelle (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

MissDaisy (K4)

Mitti (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Cain (K6)

DarthP (K6)

Hammy (K6)

Krueger (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Plaque Notesphage morphology was clear
MorphotypeSiphoviridae
Final annotation complete?Yes
Has been Phamerated?Yes
Gene List

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Amohnition_1

Amohnition_2

Amohnition_3

Amohnition_5

Amohnition_6
(terminase small subunit)

Amohnition_7
(terminase large subunit)

Amohnition_8
(portal protein)

Amohnition_9
(capsid maturation protease)

Amohnition_10

Amohnition_11
(scaffolding protein)

Amohnition_12
(major capsid protein)

Amohnition_13
(head-to-tail connector protein)

Amohnition_14
(head-to-tail connector protein)

Amohnition_15
(head-to-tail connector protein)

Amohnition_16
(head-to-tail connector protein)

Amohnition_17
(major tail protein)

Amohnition_18
(tail assembly chaperone)

Amohnition_19
(tail assembly chaperone)

Amohnition_20
(tape measure protein)

Amohnition_21
(minor tail protein)

Amohnition_22
(minor tail protein)

Amohnition_23
(minor tail protein)

Amohnition_24
(minor tail protein)

Amohnition_25
(minor tail protein)

Amohnition_26
(minor tail protein)

Amohnition_27

Amohnition_28

Amohnition_29
(lysin A)

Amohnition_30
(lysin B)

Amohnition_31
(holin)

Amohnition_32

Amohnition_33

Amohnition_34
(endonuclease)

Amohnition_35

Amohnition_36
(HTH DNA binding protein)

Amohnition_37

Amohnition_38

Amohnition_39
(queuine tRNA-glycosyltransferase)

Amohnition_40

Amohnition_41

Amohnition_42
(integrase)

Amohnition_43

Amohnition_44
(membrane protein)

Amohnition_45
(immunity repressor)

Amohnition_46
(CRO protein)

Amohnition_47
(excise)

Amohnition_48

Amohnition_49

Amohnition_50

Amohnition_51

Amohnition_52
(HTH DNA binding protein)

Amohnition_53
(WhiB family transcription factor)

Amohnition_54

Amohnition_55

Amohnition_56

Amohnition_57

Amohnition_58
(DNA polymerase III subunit)

Amohnition_59

Amohnition_60
(exonuclease)

Amohnition_61

Amohnition_62

Amohnition_63

Amohnition_64

Amohnition_65

Amohnition_66
(glutaredoxin)

Amohnition_67
(HNH endonuclease)

Amohnition_68
(DNA primase/polymerase)

Amohnition_69
(resolvase)

Amohnition_70

Amohnition_71
(HTH DNA binding protein)

Amohnition_72

Amohnition_73

Amohnition_74

Amohnition_75

Amohnition_76

Amohnition_77

Amohnition_78
(HTH DNA binding protein)

Amohnition_79

Amohnition_80

Amohnition_81

Amohnition_82

Amohnition_83
(RNA ligase)

Amohnition_84

Amohnition_85

Amohnition_86

Amohnition_87

Amohnition_88

Amohnition_89

Amohnition_90

Amohnition_91

Amohnition_92
(DNA binding domain protein)

Amohnition_93

Amohnition_94

Amohnition_95
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF140398
Refseq NumberNone yet
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload