Mycobacterium phage Cain
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Detailed Information for Phage Cain
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByThomas Cast and Kara Gallo
Year Found2014
Location FoundSpokane, WA United States of America
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates47.667363 N, 117.401673 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1621
Genome length (bp)60813
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content66.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK6
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

Frankicide (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

Lazy (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Shrek (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Dalmuri (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

Lefty (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Humbert (K3)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

Mitti (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Cain (K6)

DarthP (K6)

Hammy (K6)

Krueger (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Plaque NotesThe plaques for our phage are between 1.0-2.0 mm in size, not perfectly circular, turbid, and have blurred borders.
MorphotypeSiphoviridae
Final annotation complete?No
Has been Phamerated?Yes
Gene List

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Cain_1

Cain_2

Cain_3

Cain_5

Cain_6
(terminase, small subunit)

Cain_7
(terminase, large subunit)

Cain_8
(portal protein)

Cain_9
(capsid maturation protease)

Cain_10

Cain_11
(scaffolding protein)

Cain_12
(major capsid protein)

Cain_13
(head-to-tail connector protein)

Cain_14
(head-to-tail connector protein)

Cain_15
(head-to-tail connector protein)

Cain_16
(head-to-tail connector protein)

Cain_17
(major tail protein)

Cain_18
(tail assembly chaperone)

Cain_19
(tail assembly chaperone)

Cain_20
(tape measure protein)

Cain_21
(minor tail protein)

Cain_22
(minor tail protein)

Cain_23
(minor tail protein)

Cain_24
(minor tail protein)

Cain_25
(minor tail protein)

Cain_26
(minor tail protein)

Cain_27
(minor tail protein)

Cain_28
(minor tail protein)

Cain_29

Cain_30
(lysin A)

Cain_31
(lysin B)

Cain_32
(holin)

Cain_33

Cain_34

Cain_35

Cain_36

Cain_37

Cain_38
(helix-turn-helix DNA binding domain)

Cain_39

Cain_40

Cain_41

Cain_43
(integrase, (Y-int))

Cain_44

Cain_45
(membrane protein)

Cain_46
(immunity repressor)

Cain_47
(CRO (control of repressor s operator))

Cain_48
(excise)

Cain_49

Cain_50

Cain_51

Cain_52

Cain_53
(helix-turn-helix DNA binding domain)

Cain_54
(WhiB family transcription factor)

Cain_55

Cain_56

Cain_57

Cain_58

Cain_59

Cain_60
(DnaQ exonuclease (DNA polymerase III subunit))

Cain_61

Cain_62

Cain_63
(exonuclease)

Cain_64

Cain_65

Cain_66

Cain_67

Cain_68

Cain_69

Cain_70
(NrdH glutaredoxin)

Cain_71
(HNH endonuclease)

Cain_72

Cain_73
(DNA primase/polymerase)

Cain_74

Cain_75
(RusA resolvase (endonuclease))

Cain_76

Cain_77
(helix-turn-helix DNA binding domain)

Cain_78

Cain_79

Cain_80

Cain_81

Cain_82
(SprT protease)

Cain_83

Cain_84
(helix-turn-helix DNA binding domain)

Cain_85

Cain_86

Cain_87

Cain_88
(helix-turn-helix DNA binding domain)

Cain_89

Cain_90

Cain_91

Cain_92
(rtcB RNA ligase)

Cain_93

Cain_94

Cain_95

Cain_96

Cain_97

Cain_98

Cain_99

Cain_100

Cain_101

Cain_102
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF324913
Refseq NumberNone yet
Available Files
EM PictureDownload
GenBank File for PhameratorDownload