Mycobacterium phage Thyatira
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Detailed Information for Phage Thyatira
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLydia Doughty
Year Found2017
Location FoundColumbus, IN United States
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates39.1951 N, 85.88614 W Map
Discovery NotesThyatira was found at 11:51 am on 08/24/17. Thyatira was extracted from a soil sample taken from the practice football field at Columbus East High School in Columbus, Indiana. The temperature was 23.3 degrees Celsius and the humidity was 41%.
Naming NotesThis phage was named after the Ancient Greek city of Thyatira and the church of Thyatira from the book of Revelations.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1248
Genome length (bp)63874
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCAGTGGCAT
GC Content64.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK5
Cluster Life CycleTemperate
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

MaeVan (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Noonan (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TrippyB (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Chris (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

Lefty (K1)

Lela18 (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mendoza (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TinkerBelle (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

BoostSeason (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Euphorie (K6)

Hammy (K6)

Krueger (K6)

Lazy (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotation StatusIn GenBank
Plaque NotesThyatira's morphology forms in small circles (~2-5mm) and is completely transparent.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Thyatira_1

Thyatira_2

Thyatira_3

Thyatira_5
(terminase small subunit)

Thyatira_6
(terminase large subunit)

Thyatira_7
(portal protein)

Thyatira_8
(capsid maturation protease)

Thyatira_9

Thyatira_10
(scaffolding protein)

Thyatira_11
(major capsid protein)

Thyatira_12
(head-to-tail connector complex protein)

Thyatira_13
(head-to-tail connector complex protein)

Thyatira_14

Thyatira_15
(head-to-tail connector complex protein)

Thyatira_16
(major tail protein)

Thyatira_17
(tail assembly chaperone)

Thyatira_18
(tail assembly chaperone)

Thyatira_19
(tape measure protein)

Thyatira_20
(minor tail protein)

Thyatira_21
(minor tail protein)

Thyatira_22
(minor tail protein)

Thyatira_23
(minor tail protein)

Thyatira_24

Thyatira_25
(minor tail protein)

Thyatira_26

Thyatira_27
(minor tail protein)

Thyatira_28

Thyatira_29
(lysin A)

Thyatira_30
(lysin B)

Thyatira_31
(holin)

Thyatira_32

Thyatira_33

Thyatira_34
(exonuclease)

Thyatira_35

Thyatira_36

Thyatira_37
(helix-turn-helix DNA binding domain protein)

Thyatira_38

Thyatira_39

Thyatira_40
(integrase)

Thyatira_41

Thyatira_42
(membrane protein)

Thyatira_43
(immunity repressor)

Thyatira_44
(Cro protein)

Thyatira_45

Thyatira_46

Thyatira_47

Thyatira_48
(helix-turn-helix DNA binding domain protein)

Thyatira_49

Thyatira_50
(DNA polymerase III sliding clamp (Beta))

Thyatira_51

Thyatira_52

Thyatira_53

Thyatira_54

Thyatira_55
(DNA polymerase III subunit)

Thyatira_56

Thyatira_57

Thyatira_58
(exonuclease)

Thyatira_59

Thyatira_60

Thyatira_61

Thyatira_62

Thyatira_63
(NrdH-like glutaredoxin)

Thyatira_64
(HNH endonuclease)

Thyatira_65
(HNH endonuclease)

Thyatira_66
(DNA primase/polymerase)

Thyatira_67
(DNA helicase)

Thyatira_68
(resolvase)

Thyatira_69
(helix-turn-helix DNA binding domain protein)

Thyatira_70

Thyatira_71

Thyatira_72
(helix-turn-helix DNA binding domain protein)

Thyatira_73

Thyatira_74
(helix-turn-helix DNA binding domain protein)

Thyatira_75

Thyatira_76

Thyatira_77

Thyatira_78

Thyatira_79
(RNA ligase)

Thyatira_80

Thyatira_81

Thyatira_82

Thyatira_83

Thyatira_84

Thyatira_85

Thyatira_86
(queuine tRNA-ribosyltransferase)

Thyatira_87

Thyatira_88

Thyatira_89

Thyatira_90

Thyatira_91

Thyatira_92

Thyatira_93

Thyatira_94

Thyatira_95
(helix-turn-helix DNA binding domain protein)

Thyatira_96

Thyatira_97
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH576966
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 50
Pitt Freezer Box Grid# E7
Available Files
GenBank File for PhameratorDownload