Mycobacterium phage Scarlett
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Detailed Information for Phage Scarlett
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCoad, Gordon
Year Found2014
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates47.667062 N, 117.403006 W Map
Discovery NotesDiscovered in soil in front of Hughes Hall on Gonzaga University campus
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 4, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage222
Genome length (bp)62306
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content68.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

MaeVan (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Noonan (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TrippyB (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Chris (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

Lefty (K1)

Lela18 (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mendoza (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TinkerBelle (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

BoostSeason (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Euphorie (K6)

Hammy (K6)

Krueger (K6)

Lazy (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotation StatusIn GenBank
Plaque NotesRound, cloudy, ~2mm plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Scarlett_1

Scarlett_2

Scarlett_3

Scarlett_5

Scarlett_6
(terminase, small subunit)

Scarlett_7
(terminase, large subunit)

Scarlett_8
(portal protein)

Scarlett_9
(capsid maturation protease)

Scarlett_10

Scarlett_11
(scaffolding protein)

Scarlett_12
(major capsid protein)

Scarlett_13
(head-to-tail connector complex protein)

Scarlett_14
(head-to-tail connector complex protein)

Scarlett_15

Scarlett_16
(head-to-tail connector complex protein)

Scarlett_17
(major tail protein)

Scarlett_18
(tail assembly chaperone)

Scarlett_19
(tail assembly chaperone)

Scarlett_20
(tape measure protein)

Scarlett_21
(minor tail protein)

Scarlett_22
(minor tail protein)

Scarlett_23
(minor tail protein)

Scarlett_24
(minor tail protein)

Scarlett_25
(minor tail protein)

Scarlett_26
(minor tail protein)

Scarlett_27
(minor tail protein)

Scarlett_28

Scarlett_29
(lysin A)

Scarlett_30
(lysin B)

Scarlett_31
(holin)

Scarlett_32

Scarlett_33

Scarlett_34

Scarlett_35
(nuclease)

Scarlett_36

Scarlett_37
(helix-turn-helix DNA binding domain)

Scarlett_38

Scarlett_39

Scarlett_40

Scarlett_41

Scarlett_42

Scarlett_43

Scarlett_44
(queuine tRNA-ribosyltransferase)

Scarlett_45
(integrase, (Y-int))

Scarlett_46
(membrane protein)

Scarlett_47
(immunity repressor)

Scarlett_48
(Cro (control of repressor))

Scarlett_49
(excise)

Scarlett_50

Scarlett_51

Scarlett_52

Scarlett_53

Scarlett_54
(helix-turn-helix DNA binding domain)

Scarlett_55
(WhiB family transcription factor)

Scarlett_56

Scarlett_57

Scarlett_58

Scarlett_59

Scarlett_60

Scarlett_61
(DnaQ-like exonuclease (DNA polymerase III subunit))

Scarlett_62

Scarlett_63

Scarlett_64

Scarlett_65
(exonuclease)

Scarlett_66

Scarlett_67

Scarlett_68

Scarlett_69

Scarlett_70

Scarlett_71
(NrdH-like glutaredoxin)

Scarlett_72
(HNH endonuclease)

Scarlett_73
(DNA primase/polymerase)

Scarlett_74
(RusA-like resolvase (endonuclease))

Scarlett_75

Scarlett_76
(helix-turn-helix DNA binding domain)

Scarlett_77

Scarlett_78

Scarlett_79
(SprT-like protease)

Scarlett_80

Scarlett_81
(helix-turn-helix DNA binding domain)

Scarlett_82

Scarlett_83
(helix-turn-helix DNA binding domain)

Scarlett_84

Scarlett_85

Scarlett_86
(rtcB-like RNA ligase)

Scarlett_87

Scarlett_88

Scarlett_89

Scarlett_90

Scarlett_91

Scarlett_92

Scarlett_93

Scarlett_94

Scarlett_95
(antitoxin in toxin/antitoxin system, HicB-like)

Scarlett_96
(toxin in toxin/antitoxin system, HicA-like)

Scarlett_97
(esterase)

Scarlett_98

Scarlett_99

Scarlett_100

Scarlett_101

Scarlett_102

Scarlett_103
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH910042
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5.2*10^9 pfu/mL
Date of SEA Lysate Titering Oct 30, 2014
Pitt Freezer Box# 17
Pitt Freezer Box Grid# D7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload