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Mycobacterium phage Omnicron
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Detailed Information for Phage Omnicron
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTasha Baer
Year Found2013
Location FoundFt. Myers, FL USA
Finding InstitutionFlorida Gulf Coast University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates26.459845 N, 81.768144 W Map
Discovery NotesThe soil sample was taken from dark sand in a patch of weeds next to a sign. It was top soil, about three inches down.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 6, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3553
Genome length (bp)61511
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGTGGCAT
GC Content64.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK5
Other Cluster Members

Click to View

Aella (None)

AllaKazam (None)

Aloysius (None)

Andy (None)

Asayake (None)

Aspen (None)

Auroraborealis (None)

BackInNotBlack (None)

BaenaC (None)

Bailcon (None)

BasselJr (None)

Boogaloo (None)

Boyz (None)

Calcy (None)

Caroline (None)

Caspian (None)

Chat (None)

Cirrostratus (None)

Clarence (None)

Cookland (None)

Cortana (None)

Cunlay (None)

Dcuz (None)

Denara (None)

Dor110 (None)

DoubleSloth (None)

Dougal (None)

DrThomas (None)

DubyaDubya (None)

ElegantBeing (None)

Erinyes (None)

Fisch (None)

FitzSpotz (None)

Frankicide (None)

GoBuffs (None)

GUsh (None)

GUsthebus (None)

Isa16 (None)

Jallie (None)

Jamanda (None)

Jameskc (None)

Kennel (None)

KevinPhangos (None)

LaFlor (None)

LanaDelPhay (None)

Lancelot (None)

Lazy (None)

LilPhil (None)

LuckyWorm (None)

MacArthur (None)

Machine (None)

ManBun (None)

Marilu (None)

Marvolo (None)

McSparkle (None)

Meow (None)

Mileyphyrus (None)

Misa (None)

Mochi (None)

Nestitis (None)

NimNO (None)

Pablo (None)

PeachyKay (None)

Pegasicorn (None)

Phaedra (None)

Phaguccine (None)

Phlynn (None)

Pita107 (None)

Plaqccine (None)

Pluto15 (None)

Poochlock (None)

PresidentPhayn (None)

PresThayne (None)

PuddlePaige (None)

Reina (None)

Rivierearbre (None)

Sabotage (None)

Shrek (None)

Smore (None)

Speckles360 (None)

SpeedyClaxton (None)

Spots16 (None)

Stoya (None)

SuJos8 (None)

SwaggyP (None)

Syra333 (None)

Thayne (None)

Tomothy (None)

TRossi (None)

Uilani (None)

Winton (None)

Wivia (None)

Yachna (None)

Yianni (None)

Zag19 (None)

Zagup (None)

Zhage (None)

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

Bash (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Biglebops (K1)

Blessed (K1)

BlueSky (K1)

Capricorn (K1)

Christoria (K1)

CREW (K1)

CrimD (K1)

Dalmuri (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Erdnod (K1)

Flash (K1)

Gansey (K1)

Geraldini (K1)

Guanica15 (K1)

Guimauve (K1)

HedwigODU (K1)

Homura (K1)

JAWS (K1)

Jeckyll (K1)

Jerome (K1)

Jersey (K1)

Jophie (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

Lefty (K1)

LeMond (K1)

LeslieK (K1)

LilPharaoh (K1)

LindNT (K1)

MicroMini (K1)

MLouK (K1)

Mozingo (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Oscar (K1)

Peanam (K1)

PhindingNemo (K1)

Phineas3776 (K1)

Pompey (K1)

Prithvi (K1)

Ramen (K1)

Rapunzel97 (K1)

Rozay (K1)

SamuelLPlaqson (K1)

Sarang (K1)

Scarlett (K1)

Schmutz (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Smurfee (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

Vidiian (K1)

Wilota (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BontFonne (K2)

Cygnus24 (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Hyperbowlee (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Persephone (K2)

TM4 (K2)

Uncooperative (K2)

Zigg (K2)

ZoeJ (K2)

Humbert (K3)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

RonKinser (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Chancellor (K4)

Cheetobro (K4)

Fionnbharth (K4)

Mitti (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

NemNuong (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Cain (K6)

DarthP (K6)

Hammy (K6)

Krueger (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Plaque NotesOmnicron is a phage that produces bulls-eye plaques that are 2 mm in diameter. The lytic portion is 1 mm in diameter.
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes95
Number of tRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Omnicron_1

Omnicron_2

Omnicron_3

Omnicron_5

Omnicron_6
(Terminase)

Omnicron_7
(Portal protein)

Omnicron_8
(capsid maturation protease)

Omnicron_9

Omnicron_10
(Scaffolding)

Omnicron_11
(Major capsid protein)

Omnicron_12
(head-to-tail connector protein)

Omnicron_13
(head-to-tail connector protein)

Omnicron_14
(head-to-tail connector protein)

Omnicron_15
(head-to-tail connector protein)

Omnicron_16
(major tail subunit)

Omnicron_17
(tail assembly chaperone)

Omnicron_18
(tail assembly chaperone)

Omnicron_19
(Tapemeasure protein)

Omnicron_20
(Minor tail subunit)

Omnicron_21
(Minor tail subunit)

Omnicron_22
(Minor tail subunit)

Omnicron_23

Omnicron_24
(Minor tail subunit)

Omnicron_25

Omnicron_26
(Minor tail subunit)

Omnicron_27

Omnicron_28

Omnicron_29

Omnicron_30
(LysA)

Omnicron_31
(LysB)

Omnicron_32
(Holin)

Omnicron_33

Omnicron_34

Omnicron_35

Omnicron_36

Omnicron_37

Omnicron_38

Omnicron_39

Omnicron_40

Omnicron_41
(Integrase, S-int)

Omnicron_42

Omnicron_43

Omnicron_44

Omnicron_45

Omnicron_46

Omnicron_47

Omnicron_48

Omnicron_49

Omnicron_50
(DNA polymerase III)

Omnicron_51

Omnicron_52

Omnicron_53

Omnicron_54

Omnicron_55

Omnicron_56

Omnicron_57

Omnicron_58

Omnicron_59

Omnicron_60

Omnicron_61

Omnicron_62

Omnicron_63

Omnicron_64
(NrdH)

Omnicron_65

Omnicron_66

Omnicron_67
(DNA primase)

Omnicron_68
(Helicase)

Omnicron_69
(RusA)

Omnicron_70

Omnicron_71

Omnicron_72

Omnicron_73

Omnicron_74
(DNA methylase)

Omnicron_75

Omnicron_76

Omnicron_77

Omnicron_78

Omnicron_79

Omnicron_80

Omnicron_81

Omnicron_82
(RtcB)

Omnicron_83

Omnicron_84

Omnicron_85

Omnicron_86

Omnicron_87

Omnicron_88

Omnicron_89

Omnicron_90

Omnicron_91

Omnicron_92

Omnicron_93

Omnicron_94

Omnicron_95

Omnicron_96
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKM363596
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload