Gordonia phage AlumE
AlumE Plaque Picture
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Detailed Information for Phage AlumE
Discovery Information
Isolation HostGordonia terrae 3612
Found ByM. Hallihan, J, Pereira, S. Coleman, and P. Patel
Year Found2020
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.445156 N, 79.953897 W Map
Discovery NotesThe soil used was found at the University of Pittsburgh outside Alumni Hall. The soil was located around a bush and was collected on August 24,2020. The soil was soft and moist and had a dark brown color.Isolated by Megan Hallihan, Julia Pereira, Sydney Coleman, and Parth Patel.
Naming NotesWe named our Phage 'AlumE' because it was our sample E and it was found outside Alumni Hall.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 19, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage860
Genome length (bp)52698
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusBeing Annotated (Expected completion by 5/1/2021)
Plaque NotesThe plaque was circular and cloudy in the middle, indicating it is a turbid plaque. Additionally, the average size of our plaque was 1.5mm.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 125
Pitt Freezer Box Grid# B8