Gordonia phage Sahara
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Detailed Information for Phage Sahara
Discovery Information
Isolation HostGordonia terrae 3612
Found BySahara Grinkewitz
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.449289 N, 79.952059 W Map
Discovery NotesI found the soil sample outside of the First Church-Christ Science on North Dithridge street, Pittsburgh 15213. The soil was lose and easy to pick up and the weather was in the 70's and sunny on the day of collection.
Naming NotesI named this phage after my first name which also stands for the Sahara Desert.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 24, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1597
Genome length (bp)45072
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Lysogeny NotesTemperate Phage
Other Cluster Members
Annotating InstitutionWashington State University
Annotation StatusAwaiting_QC
Plaque NotesMedium sized clear plaques with turbid edges
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 7.6 x 10^(9)
Pitt Freezer Box# 115
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
EM PictureDownload