Gordonia phage Samman98
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Detailed Information for Phage Samman98
Discovery Information
Isolation HostGordonia terrae 3612
Found BySamyuktha Manikandan
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.446071 N, 79.955902 W Map
Discovery NotesWeather conditions during collection:
20 degrees F, overcast, slightly windy
Weather conditions in 24 hours after collection:
high of 16 degrees F, low of 7 degrees F
The sample was immediately stored for 30 minutes prior to analysis.
Soil Conditions:
hard, cold, and snow was on ground during collection
Naming Notesnamed after founder
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 16, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage230
Genome length (bp)47548
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTGCCAAGGGGA
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ4
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNorth Carolina A&T State University
Annotation StatusBeing Annotated (Expected completion by 5/1/2021)
Plaque NotesThe plaque itself is mostly circular. The plaque is cloudy on the periphery while the center is clear. The diameter is around 1.5 mm.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 56
Pitt Freezer Box Grid# C7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload