Recently Added Phages

Snoop Edvall TurboVicky Pondwater Nairan

Recently Modified Phages

Moab Tempo StevieBAY Nike Manatee

Recently Finished Phages

Gail (A14) Chaser (L4) Quartz (EA10) Soul22 (None) Magic8 (B1)
Gordonia phage WelcomeAyanna
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage WelcomeAyanna
Discovery Information
Isolation HostGordonia terrae 3612
Found ByJordin Swanson
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.2638 N, 79.5718 W Map
Discovery NotesI found this phage in an area with rich soil at the center of campus. The phage showed multiple morphologies, so it was predicted that my sample had two different phage types in it.
Naming NotesI named my phage "WelcomeAyanna"because I adopted one of my phage morphologies out to Ayanna Barton, who named her phage "ThankyouJordi." We found our samples together, and the names worked out well with each other.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 16, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3941
Genome length (bp)53600
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesMy plaques had both small morphologies and large morphologies, which is why I adopted one of my phages out to Ayanna Barton.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

WelcomeAyanna_1
(terminase small subunit)

WelcomeAyanna_2
(terminase large subunit)

WelcomeAyanna_3
(membrane protein)

WelcomeAyanna_4
(portal protein)

WelcomeAyanna_5
(capsid maturation protease)

WelcomeAyanna_6
(major capsid protein)

WelcomeAyanna_7

WelcomeAyanna_8
(head-to-tail adaptor)

WelcomeAyanna_9
(head-to-tail stopper)

WelcomeAyanna_10

WelcomeAyanna_11
(tail terminator)

WelcomeAyanna_12
(major tail protein)

WelcomeAyanna_13
(tail assembly chaperone)

WelcomeAyanna_14
(tail assembly chaperone)

WelcomeAyanna_15

WelcomeAyanna_16
(tape measure protein)

WelcomeAyanna_17
(minor tail protein)

WelcomeAyanna_18
(minor tail protein)

WelcomeAyanna_19
(lysin A, L-Ala-D-Glu peptidase domain)

WelcomeAyanna_20
(lysin A, glycosyl hydrolase domain)

WelcomeAyanna_21
(membrane protein)

WelcomeAyanna_22
(membrane protein)

WelcomeAyanna_23
(membrane protein)

WelcomeAyanna_24
(lysin B)

WelcomeAyanna_25
(minor tail protein)

WelcomeAyanna_26

WelcomeAyanna_27
(minor tail protein)

WelcomeAyanna_28

WelcomeAyanna_29

WelcomeAyanna_30

WelcomeAyanna_31

WelcomeAyanna_32
(membrane protein)

WelcomeAyanna_33
(metalloprotease)

WelcomeAyanna_34
(membrane protein)

WelcomeAyanna_35

WelcomeAyanna_36
(membrane protein)

WelcomeAyanna_37
(lipoprotein)

WelcomeAyanna_38
(integrase)

WelcomeAyanna_39
(helix-turn-helix DNA binding domain protein)

WelcomeAyanna_40
(metalloprotease)

WelcomeAyanna_41

WelcomeAyanna_42
(methyltransferase)

WelcomeAyanna_43
(immunity repressor)

WelcomeAyanna_44
(helix-turn-helix DNA binding domain protein)

WelcomeAyanna_45

WelcomeAyanna_46

WelcomeAyanna_47
(antirepressor)

WelcomeAyanna_48

WelcomeAyanna_49
(helix-turn-helix DNA binding domain protein)

WelcomeAyanna_50
(membrane protein)

WelcomeAyanna_51

WelcomeAyanna_52

WelcomeAyanna_53

WelcomeAyanna_54

WelcomeAyanna_55

WelcomeAyanna_56

WelcomeAyanna_57

WelcomeAyanna_58

WelcomeAyanna_59
(RecE-like exonuclease)

WelcomeAyanna_60
(RecT-like ssDNA binding protein)

WelcomeAyanna_61

WelcomeAyanna_62
(DNA polymerase III subunit)

WelcomeAyanna_63
(DnaJ-like chaperonin)

WelcomeAyanna_64
(membrane protein)

WelcomeAyanna_65
(DNA methylase)

WelcomeAyanna_66
(membrane protein)

WelcomeAyanna_67

WelcomeAyanna_68

WelcomeAyanna_69

WelcomeAyanna_70

WelcomeAyanna_71

WelcomeAyanna_72

WelcomeAyanna_73

WelcomeAyanna_74
(RusA-like resolvase)

WelcomeAyanna_75

WelcomeAyanna_76

WelcomeAyanna_77

WelcomeAyanna_78
(helix-turn-helix DNA binding domain protein)

WelcomeAyanna_79

WelcomeAyanna_80

WelcomeAyanna_81

WelcomeAyanna_82

WelcomeAyanna_83
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK875793
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload