Gordonia phage Matteo
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Detailed Information for Phage Matteo
Discovery Information
Isolation HostGordonia terrae 3612
Former namesWesley
Found ByColin Lewis
Year Found2019
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4414 N, 79.96 W Map
Discovery NotesFound in a flower bed outside UPMC Presbyterian Hospital. Soil was collected by another classmate and direct isolation was performed by my wet lab instructor
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 7, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1503
Genome length (bp)44079
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesFairly large (3-4 mm) plaques that are turbid
Has been Phamerated?Yes
Gene List

Click to View

Matteo_1
(terminase small subunit)

Matteo_2
(terminase large subunit)

Matteo_3
(portal protein)

Matteo_4
(capsid maturation protease)

Matteo_5
(scaffolding protein)

Matteo_6
(major capsid protein)

Matteo_7

Matteo_8
(head-to-tail adaptor)

Matteo_9
(head-to-tail stopper)

Matteo_10

Matteo_11
(tail terminator)

Matteo_12
(major tail protein)

Matteo_13
(tail assembly chaperone)

Matteo_14
(tail assembly chaperone)

Matteo_15
(tape measure protein)

Matteo_16
(minor tail protein)

Matteo_17
(minor tail protein)

Matteo_18
(lysin A)

Matteo_19
(holin)

Matteo_20

Matteo_21

Matteo_22

Matteo_23
(lysin B)

Matteo_24

Matteo_25
(minor tail protein)

Matteo_26
(esterase)

Matteo_27

Matteo_28

Matteo_29

Matteo_30
(tyrosine integrase)

Matteo_31

Matteo_32
(DNA binding protein)

Matteo_33
(helix-turn-helix DNA binding domain protein)

Matteo_34
(metalloprotease)

Matteo_35

Matteo_36

Matteo_37
(immunity repressor)

Matteo_38
(helix-turn-helix DNA binding domain protein)

Matteo_39

Matteo_40
(DNA polymerase III sliding clamp)

Matteo_41

Matteo_42
(MerR-like helix-turn-helix DNA binding domain protein)

Matteo_43

Matteo_44

Matteo_45

Matteo_46
(RecE-like exonuclease)

Matteo_47
(RecT-like ssDNA binding protein)

Matteo_48

Matteo_49

Matteo_50

Matteo_51

Matteo_52

Matteo_53
(HNH endonuclease)

Matteo_54
(DNA methylase)

Matteo_55

Matteo_56

Matteo_57

Matteo_58

Matteo_59
(G-I-Y Y-I-G endonuclease)

Matteo_60
(helix-turn-helix DNA binding domain protein)

Matteo_61

Matteo_62
(RusA-like resolvase)

Matteo_63
(MerR-like helix-turn-helix DNA binding domain protein)

Matteo_64

Matteo_65

Matteo_66

Matteo_67

Matteo_68
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT771342
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.13 x 10^10
Pitt Freezer Box# 114
Pitt Freezer Box Grid# G2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload