Gordonia phage RavenCo17
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage RavenCo17
Discovery Information
Isolation HostGordonia terrae 3612
Found ByAlyssa Smith
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.443881 N, 79.955294 W Map
Discovery NotesMy sample was collected in a flower garden bed outside of a building at my university. The patch of soil was surrounding many flowers and trees.Outside, it was really hot and the sky was cloudless. The soil was very dry at the surface, but as I dug down deeper, it became more and more moist. The surface of the soil contained many small mulch pieces as well.
Naming NotesMy favorite childhood dog's name was Raven, and she died just few years ago. I live in Bucks County, so that is where "Co" came from. Lastly, my favorite number is 17.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 25, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1543
Genome length (bp)49663
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterUnclustered
Subcluster--
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusBeing Annotated (Expected completion by 5/1/2020)
Plaque NotesThe plaques in my plaque purification appeared very small in size. They were also very circular and were white/clear in color.
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 91
Pitt Freezer Box Grid# A4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload