Gordonia phage Gizermo
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Detailed Information for Phage Gizermo
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRousseau, Chasser, Berg, Ugwanyi
Year Found2020
Location FoundPittsburgh, PA Alleghany
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates40.44 N, 79.95 W Map
Naming NotesWe just happened to like the name Gizermo.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1348
Genome length (bp)46221
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesClear phage morphology
Number of Genes75
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Gizermo_1
(terminase small subunit)

Gizermo_2
(terminase large subunit)

Gizermo_3
(portal protein)

Gizermo_4
(capsid maturation protease)

Gizermo_5
(scaffolding protein)

Gizermo_6
(major capsid protein)

Gizermo_7

Gizermo_8
(head-to-tail adaptor)

Gizermo_9
(head-to-tail stopper)

Gizermo_10

Gizermo_11
(tail terminator)

Gizermo_12
(major tail protein)

Gizermo_13
(tail assembly chaperone)

Gizermo_14
(tail assembly chaperone)

Gizermo_15
(tape measure protein)

Gizermo_16
(minor tail protein)

Gizermo_17
(minor tail protein)

Gizermo_18
(lysin A)

Gizermo_19

Gizermo_20

Gizermo_21

Gizermo_22

Gizermo_23

Gizermo_24
(lysin B)

Gizermo_25
(minor tail protein)

Gizermo_26

Gizermo_27

Gizermo_28
(minor tail protein)

Gizermo_29

Gizermo_30
(excise)

Gizermo_31

Gizermo_32

Gizermo_33

Gizermo_34

Gizermo_35

Gizermo_36

Gizermo_37
(tyrosine integrase)

Gizermo_38

Gizermo_39

Gizermo_40
(helix-turn-helix DNA binding domain protein)

Gizermo_41
(metalloprotease)

Gizermo_42

Gizermo_43

Gizermo_44
(immunity repressor)

Gizermo_45
(Cro protein)

Gizermo_46

Gizermo_47
(DNA polymerase III sliding clamp)

Gizermo_48

Gizermo_49

Gizermo_50

Gizermo_51

Gizermo_52

Gizermo_53
(RecE-like exonuclease)

Gizermo_54
(RecT-like ssDNA binding protein)

Gizermo_55

Gizermo_56

Gizermo_57

Gizermo_58

Gizermo_59
(ASC-1 transcription coactivator)

Gizermo_60

Gizermo_61
(DNA methylase)

Gizermo_62

Gizermo_63

Gizermo_64

Gizermo_65

Gizermo_66

Gizermo_67

Gizermo_68
(RusA-like resolvase)

Gizermo_69

Gizermo_70
(helix-turn-helix DNA binding domain protein)

Gizermo_71

Gizermo_72

Gizermo_73

Gizermo_74

Gizermo_75
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ681509
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 125
Pitt Freezer Box Grid# D12
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload