Detailed Information for Phage Matteo |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Former names | Wesley |
Found By | Colin Lewis |
Year Found | 2019 |
Location Found | Pittsburgh, PA United States of America |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.4414 N, 79.96 W Map |
Discovery Notes | Found in a flower bed outside UPMC Presbyterian Hospital. Soil was collected by another classmate and direct isolation was performed by my wet lab instructor |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 7, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1503 |
Genome length (bp) | 44079 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | TACCAGGGGGA |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CZ |
Subcluster | CZ2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Fairly large (3-4 mm) plaques that are turbid |
Number of Genes | 68 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT771342 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.13 x 10^10 |
Pitt Freezer Box# |
114 |
Pitt Freezer Box Grid# |
G2 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |