Gordonia phage Nettuno
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Detailed Information for Phage Nettuno
Discovery Information
Isolation HostGordonia terrae 3612
Found ByLivia Daggett and Carolyn Fochek
Year Found2021
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.47 N, 79.96 W Map
Discovery NotesSoil was very thin and smooth. It was about 70 degrees and rainy. Taken a few feet away from vegetation.
Naming NotesThe Italian word for the planet Neptune.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2970
Genome length (bp)44528
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesSize range 2-4mm after 7 days incubation
Round
Turbid
Number of Genes71
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Nettuno_1
(terminase small subunit)

Nettuno_2
(terminase large subunit)

Nettuno_3
(portal protein)

Nettuno_4
(capsid maturation protease)

Nettuno_5
(scaffolding protein)

Nettuno_6
(major capsid protein)

Nettuno_7

Nettuno_8
(head-to-tail adaptor)

Nettuno_9
(head-to-tail stopper)

Nettuno_10

Nettuno_11
(tail terminator)

Nettuno_12
(major tail protein)

Nettuno_13
(tail assembly chaperone)

Nettuno_14
(tail assembly chaperone)

Nettuno_15
(tape measure protein)

Nettuno_16
(minor tail protein)

Nettuno_17
(minor tail protein)

Nettuno_18
(lysin A)

Nettuno_19

Nettuno_20

Nettuno_21

Nettuno_22

Nettuno_23
(lysin B)

Nettuno_24
(minor tail protein)

Nettuno_25

Nettuno_26
(minor tail protein)

Nettuno_27

Nettuno_28

Nettuno_29

Nettuno_30
(BrnT-like toxin)

Nettuno_31

Nettuno_32
(lipoprotein)

Nettuno_33
(tyrosine integrase)

Nettuno_34

Nettuno_35

Nettuno_36
(helix-turn-helix DNA binding domain protein)

Nettuno_37
(IrrE-like protein)

Nettuno_38

Nettuno_39

Nettuno_40
(immunity repressor)

Nettuno_41
(Cro protein)

Nettuno_42

Nettuno_43
(DNA polymerase III sliding clamp beta)

Nettuno_44

Nettuno_45
(excise)

Nettuno_46

Nettuno_47

Nettuno_48

Nettuno_49
(RecE-like exonuclease)

Nettuno_50
(RecT-like ssDNA binding protein)

Nettuno_51

Nettuno_52

Nettuno_53

Nettuno_54

Nettuno_55
(ASC-1 transcription coactivator)

Nettuno_56

Nettuno_57
(DNA methyltransferase)

Nettuno_58

Nettuno_59

Nettuno_60

Nettuno_61

Nettuno_62

Nettuno_63
(RepA-like replication initiator)

Nettuno_64
(helicase loader)

Nettuno_65

Nettuno_66
(RusA-like resolvase)

Nettuno_67
(helix-turn-helix DNA binding domain protein)

Nettuno_68

Nettuno_69

Nettuno_70

Nettuno_71
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP297544
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 141
Pitt Freezer Box Grid# F8
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload