Gordonia phage Agueybana
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Detailed Information for Phage Agueybana
Discovery Information
Isolation HostGordonia terrae 3612
Found ByEdwin Vazquez
Year Found2020
Location FoundCayey, PR United States
Finding InstitutionUniversity of Puerto Rico at Cayey
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates18.135 N, 66.0979 W Map
Discovery NotesMoist soil, top layer.
Naming NotesAgueybana was the main chief of the Taino Indians in Puerto Rico at the time of the Spanish conquest in 1493.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 5, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3048
Genome length (bp)52807
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Puerto Rico at Cayey
Annotation StatusIn GenBank
Plaque NotesSmall, clear plaques
Number of Genes85
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Agueybana_1
(terminase small subunit)

Agueybana_2
(terminase large subunit)

Agueybana_3

Agueybana_4
(portal protein)

Agueybana_5
(capsid maturation protease)

Agueybana_6
(major capsid protein)

Agueybana_7

Agueybana_8
(head-to-tail adaptor)

Agueybana_9
(head-to-tail stopper)

Agueybana_10
(minor capsid protein)

Agueybana_11
(tail terminator)

Agueybana_12
(major tail protein)

Agueybana_13

Agueybana_14
(tail assembly chaperone)

Agueybana_15
(tail assembly chaperone)

Agueybana_16

Agueybana_17
(tape measure protein)

Agueybana_18
(minor tail protein)

Agueybana_19
(minor tail protein)

Agueybana_20
(lysin A, L-Ala-D-Glu peptidase domain)

Agueybana_21
(lysin A, glycosyl hydrolase domain)

Agueybana_22
(holin)

Agueybana_23

Agueybana_24

Agueybana_25

Agueybana_26
(lysin B)

Agueybana_27
(minor tail protein)

Agueybana_28

Agueybana_29
(minor tail protein)

Agueybana_30
(minor tail protein)

Agueybana_31

Agueybana_32

Agueybana_33

Agueybana_34

Agueybana_35
(HicB-like antitoxin)

Agueybana_36
(HicA-like toxin)

Agueybana_37

Agueybana_38
(tyrosine integrase)

Agueybana_39
(helix-turn-helix DNA binding domain protein)

Agueybana_40
(metalloprotease)

Agueybana_41

Agueybana_42
(helix-turn-helix DNA binding domain protein)

Agueybana_43

Agueybana_44

Agueybana_45
(helix-turn-helix DNA binding domain protein)

Agueybana_46
(immunity repressor)

Agueybana_47
(excise)

Agueybana_48

Agueybana_49

Agueybana_50
(antirepressor)

Agueybana_51

Agueybana_52

Agueybana_53

Agueybana_54

Agueybana_55

Agueybana_56
(DnaQ-like DNA polymerase III subunit)

Agueybana_57

Agueybana_58
(RecE-like exonuclease)

Agueybana_59
(RecT-like ssDNA binding protein)

Agueybana_60

Agueybana_61

Agueybana_62

Agueybana_63

Agueybana_64
(DnaJ-like chaperonin)

Agueybana_65

Agueybana_66

Agueybana_67
(DNA methylase)

Agueybana_68

Agueybana_69

Agueybana_70

Agueybana_71

Agueybana_72

Agueybana_73

Agueybana_74

Agueybana_75

Agueybana_76
(RusA-like resolvase)

Agueybana_77

Agueybana_78

Agueybana_79

Agueybana_80
(MerR-like helix-turn-helix DNA binding domain protein)

Agueybana_81

Agueybana_82

Agueybana_83

Agueybana_84

Agueybana_85
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ274304
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload