| Detailed Information for Phage AlumE |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | M. Hallihan, J, Pereira, S. Coleman, and P. Patel |
| Year Found | 2020 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.445156 N, 79.953897 W Map |
| Discovery Notes | The soil used was found at the University of Pittsburgh outside Alumni Hall. The soil was located around a bush and was collected on August 24,2020. The soil was soft and moist and had a dark brown color.Isolated by Megan Hallihan, Julia Pereira, Sydney Coleman, and Parth Patel. |
| Naming Notes | We named our Phage 'AlumE' because it was our sample E and it was found outside Alumni Hall. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 19, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 860 |
| Genome length (bp) | 52698 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGCTGGGGA |
| GC Content | 66.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CZ |
| Subcluster | CZ1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | The plaque was circular and cloudy in the middle, indicating it is a turbid plaque. Additionally, the average size of our plaque was 1.5mm. |
| Number of Genes | 82 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ171374 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
125 |
| Pitt Freezer Box Grid# |
B8 |
| Available Files |
| GenBank File for Phamerator | Download |