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Mycobacterium phage BigCheese
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Detailed Information for Phage BigCheese
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByLexi Marx
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.49153 N, 80.034324 W Map
Discovery NotesThis sample was collected in the morning while there was morning dew on the edge of woods near a bird feeder.
Naming NotesThis phage is named after my father Jeff Marx.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 27, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1546
Genome length (bp)72810
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Lysogeny NotesForms mesas. No further testing was done.
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

BigCheese_1

BigCheese_2
(terminase small subunit)

BigCheese_3

BigCheese_4
(terminase large subunit)

BigCheese_5
(portal protein)

BigCheese_6
(capsid maturation protease)

BigCheese_7
(scaffolding protein)

BigCheese_8
(major capsid protein)

BigCheese_9
(head-to-tail adaptor)

BigCheese_10
(head-to-tail stopper)

BigCheese_11

BigCheese_12
(tail terminator)

BigCheese_13
(major tail protein)

BigCheese_14
(tail assembly chaperone)

BigCheese_15
(tail assembly chaperone)

BigCheese_16
(tape measure protein)

BigCheese_17
(minor tail protein)

BigCheese_18
(minor tail protein)

BigCheese_19
(minor tail protein)

BigCheese_20
(minor tail protein)

BigCheese_21

BigCheese_22

BigCheese_23

BigCheese_24
(minor tail protein)

BigCheese_25

BigCheese_26

BigCheese_27
(lysin A)

BigCheese_28
(lysin B)

BigCheese_29

BigCheese_30

BigCheese_31

BigCheese_32
(glutaredoxin)

BigCheese_33

BigCheese_34

BigCheese_35
(nucleotidyl transferase)

BigCheese_36
(Lsr2-like DNA bridging protein)

BigCheese_37

BigCheese_38
(integrase)

BigCheese_39

BigCheese_40
(immunity repressor)

BigCheese_41
(Cro protein)

BigCheese_42
(excise)

BigCheese_43

BigCheese_44

BigCheese_45

BigCheese_46

BigCheese_47
(esterase)

BigCheese_48
(metallophosphoesterase)

BigCheese_49

BigCheese_50

BigCheese_51

BigCheese_52

BigCheese_53

BigCheese_54

BigCheese_55
(Ro-like RNA binding protein)

BigCheese_56

BigCheese_57

BigCheese_58

BigCheese_59

BigCheese_60

BigCheese_61

BigCheese_62

BigCheese_63
(ssDNA binding protein)

BigCheese_64

BigCheese_65
(ParB-like nuclease domain protein)

BigCheese_66

BigCheese_67
(HNH endonuclease)

BigCheese_68

BigCheese_69

BigCheese_70
(dsDNA helicase)

BigCheese_71
(WhiB family transcription factor)

BigCheese_72

BigCheese_73

BigCheese_74
(phosphoribosyl transferase)

BigCheese_75
(nicotinate ribosyltransferase)

BigCheese_76
(polynucleotide kinase)

BigCheese_77

BigCheese_78

BigCheese_79

BigCheese_80
(RusA-like resolvase)

BigCheese_81
(WhiB family transcription factor)

BigCheese_82
(WhiB family transcription factor)

BigCheese_83

BigCheese_84

BigCheese_85
(ssDNA binding protein)

BigCheese_86

BigCheese_87

BigCheese_88
(RNA ligase)

BigCheese_89
(HNH endonuclease)

BigCheese_90
(ClpP-like protease)

BigCheese_91

BigCheese_92

BigCheese_93

BigCheese_94

BigCheese_95
(HNH endonuclease)

BigCheese_96

BigCheese_97

BigCheese_98
(exonuclease)

BigCheese_99

BigCheese_100
(HNH endonuclease)

BigCheese_101

BigCheese_102

BigCheese_103

BigCheese_105

BigCheese_109

BigCheese_110

BigCheese_116

BigCheese_117

BigCheese_119

BigCheese_120

BigCheese_122

BigCheese_124

BigCheese_125

BigCheese_126

BigCheese_127

BigCheese_128

BigCheese_129

BigCheese_130

BigCheese_131

BigCheese_132

BigCheese_133

BigCheese_134

BigCheese_135

BigCheese_136

BigCheese_137

BigCheese_138

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH834600
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# D12
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload