Mycobacterium phage Halena
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Detailed Information for Phage Halena
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByHaley Hammel and Alyna Fernandes
Year Found2017
Location FoundNorth Andover, MA United States
Finding InstitutionMerrimack College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.6705 N, 71.1236 W Map
Discovery NotesOur sample was collected in local moist soil on the Merrimack Campus.
Naming NotesThe name is a combination of both of our names, "Ha" from Haley and "lena" from Alyna.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 19, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage701
Genome length (bp)73871
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGAACGGCC
GC Content58.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL1
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusAwaiting_QC
Plaque NotesAll of our phage were circular and about the same size. They were all clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 73
Pitt Freezer Box Grid# H9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload