Mycobacterium phage Netyap
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Detailed Information for Phage Netyap
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySydney Winchel
Year Found2016
Location FoundCullowhee, NC USA
Finding InstitutionWestern Carolina University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates35.310051 N, 83.18727 W Map
Discovery NotesFound in Cullowhee Creek at Cullowhee NC
Phage Enzyme Tool predicts cluster G
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 4, 2020
Sequencing FacilityWestern Carolina University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage219
Genome length (bp)76366
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCollege of Charleston
Annotation StatusIn GenBank
Plaque NotesSmaller plaques, about .98mm
Lytic
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Netyap_1

Netyap_2
(terminase small subunit)

Netyap_3

Netyap_4
(terminase large subunit)

Netyap_5
(portal protein)

Netyap_6
(MuF-like minor capsid protein)

Netyap_7
(scaffolding protein)

Netyap_8
(major capsid protein)

Netyap_9
(head-to-tail adaptor)

Netyap_10
(head-to-tail stopper)

Netyap_11

Netyap_12
(tail terminator)

Netyap_13
(major tail protein)

Netyap_14
(tail assembly chaperone)

Netyap_15
(tail assembly chaperone)

Netyap_16
(tape measure protein)

Netyap_17
(minor tail protein)

Netyap_18
(minor tail protein)

Netyap_19
(minor tail protein)

Netyap_20
(minor tail protein)

Netyap_21

Netyap_22

Netyap_23

Netyap_24

Netyap_25

Netyap_26

Netyap_27
(lysin A)

Netyap_28
(lysin B)

Netyap_29

Netyap_30

Netyap_31

Netyap_32
(NrdH-like glutaredoxin)

Netyap_33

Netyap_34

Netyap_35
(nucleotidyltransferase)

Netyap_36
(Lsr2-like DNA bridging protein)

Netyap_37

Netyap_38
(tyrosine integrase)

Netyap_39

Netyap_40
(immunity repressor)

Netyap_41
(Cro protein)

Netyap_42
(excise)

Netyap_43

Netyap_44

Netyap_45

Netyap_46

Netyap_47
(metallophosphoesterase)

Netyap_48

Netyap_49

Netyap_50

Netyap_51

Netyap_52

Netyap_53

Netyap_54

Netyap_55

Netyap_56
(Ro-like RNA binding protein)

Netyap_57

Netyap_58

Netyap_59

Netyap_60

Netyap_61

Netyap_62

Netyap_63

Netyap_64
(ERF family ssDNA binding protein)

Netyap_65

Netyap_66
(ParB-like nuclease domain protein)

Netyap_67

Netyap_68

Netyap_69

Netyap_70

Netyap_71
(DnaB-like dsDNA helicase)

Netyap_72
(WhiB family transcription factor)

Netyap_73

Netyap_74

Netyap_75
(phosphoribosyl pyrophosphate transferase)

Netyap_76
(nicotinate ribosyltransferase)

Netyap_77
(polynucleotide kinase)

Netyap_78

Netyap_79

Netyap_80

Netyap_81
(RusA-like resolvase)

Netyap_82
(WhiB family transcription factor)

Netyap_83
(WhiB family transcription factor)

Netyap_84

Netyap_85

Netyap_86
(ssDNA binding protein)

Netyap_87
(HicA-like toxin)

Netyap_88
(RNA ligase)

Netyap_89
(ClpP-like protease)

Netyap_90

Netyap_91

Netyap_92

Netyap_93

Netyap_94
(HNH endonuclease)

Netyap_95

Netyap_96

Netyap_97
(DnaQ-like DNA polymerase III subunit)

Netyap_98

Netyap_99
(HNH endonuclease)

Netyap_100

Netyap_101

Netyap_102

Netyap_104

Netyap_108

Netyap_109

Netyap_115

Netyap_116

Netyap_118

Netyap_119

Netyap_121

Netyap_123

Netyap_124

Netyap_125

Netyap_126

Netyap_127

Netyap_128

Netyap_129

Netyap_130

Netyap_131

Netyap_132

Netyap_133

Netyap_134

Netyap_135

Netyap_136

Netyap_137

Netyap_138
(AAA-ATPase)

Netyap_139

Netyap_140

Netyap_141

Netyap_142

Netyap_143

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW578835
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 43
Pitt Freezer Box Grid# F10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload