Mycobacterium phage Samty
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Detailed Information for Phage Samty
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByStephanie Lezo
Year Found2016
Location FoundHuntsville, TX USA
Finding InstitutionUniversity of Houston-Downtown
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates30.7132 N, 95.5504 W Map
Naming NotesMy phage Samty was discovered at Sam Houston State University outside of my friends dorm. Colleges are known to have good and fun parties therefore the -ty part is from the word party. I put the words Sam and -ty together to make my phages name Samty.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1193
Genome length (bp)75307
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content59.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL3
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Houston-Downtown
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Samty_1

Samty_2
(terminase small subunit)

Samty_3

Samty_4

Samty_5
(terminase)

Samty_6
(portal protein)

Samty_7
(MuF-like minor capsid protein)

Samty_8
(scaffolding protein)

Samty_9
(major capsid protein)

Samty_10
(head-to-tail adaptor)

Samty_11
(head-to-tail stopper)

Samty_12

Samty_13
(tail terminator)

Samty_14
(major tail protein)

Samty_15
(tail assembly chaperone)

Samty_16
(tail assembly chaperone)

Samty_17
(tape measure protein)

Samty_18
(minor tail protein)

Samty_19
(minor tail protein)

Samty_20
(minor tail protein)

Samty_21
(minor tail protein)

Samty_22
(minor tail protein)

Samty_23

Samty_24

Samty_25

Samty_26
(lysin A)

Samty_27
(holin)

Samty_28
(lysin B)

Samty_29

Samty_30

Samty_31
(glutaredoxin)

Samty_32

Samty_33
(nucleotidyltransferase)

Samty_34
(Lsr2-like DNA binding protein)

Samty_35

Samty_36
(integrase)

Samty_37

Samty_38
(immunity repressor)

Samty_39
(helix-turn-helix DNA binding domain protein)

Samty_40
(excise)

Samty_41

Samty_42

Samty_43

Samty_44
(metallophosphoesterase)

Samty_45

Samty_46

Samty_47

Samty_48
(membrane protein)

Samty_50

Samty_51

Samty_52

Samty_53

Samty_54
(Ro-like RNA binding protein)

Samty_55

Samty_56

Samty_57

Samty_58

Samty_59

Samty_60

Samty_61
(RecB-like exonuclease)

Samty_62
(ERF family ssDNA binding protein)

Samty_63

Samty_64
(ParB-like nuclease domain protein)

Samty_65

Samty_66
(HNH endonuclease)

Samty_67

Samty_68

Samty_69
(DNA helicase)

Samty_70
(WhiB family transcription factor)

Samty_71

Samty_72

Samty_73
(phosphoribosyl transferase)

Samty_74
(nicotinate ribosyltransferase)

Samty_75
(polynucleotide kinase)

Samty_76

Samty_77
(RusA-like resolvase (endonuclease))

Samty_78
(WhiB family transcription factor)

Samty_79
(WhiB family transcription factor)

Samty_80

Samty_81

Samty_82
(ssDNA binding protein)

Samty_83

Samty_84

Samty_85
(RNA ligase)

Samty_86
(ClpP protease)

Samty_87

Samty_88

Samty_89

Samty_90

Samty_91
(HNH endonuclease)

Samty_92

Samty_93

Samty_94
(DNA polymerase III subunit)

Samty_95

Samty_96

Samty_97

Samty_98
(HNH endonuclease)

Samty_99

Samty_100

Samty_101

Samty_102

Samty_104

Samty_106

Samty_110

Samty_113

Samty_114

Samty_117

Samty_118

Samty_119

Samty_120

Samty_121

Samty_122

Samty_123

Samty_124

Samty_125

Samty_126

Samty_127

Samty_128

Samty_129

Samty_130

Samty_131

Samty_132
(AAA-ATPase)

Samty_133

Samty_134

Samty_135

Samty_136

Samty_137
(membrane protein)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH727559
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload