Mycobacterium phage Finemlucis
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Detailed Information for Phage Finemlucis
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Duplicates of this PhageR11yGr8
Found BySalvador Mosqueda
Year Found2015
Location FoundWamego, KS USA
Finding InstitutionKansas State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates39.244472 N, 96.317194 W Map
Discovery NotesOrganic strawberry bed
Collected on September 29, 2015 at 7am
59 degrees F



Naming NotesLatin for the end since its a virus.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 10, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage644
Genome length (bp)77031
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesClear plaques, closely concentrated to one another, above average plaque size
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Finemlucis_1

Finemlucis_2
(terminase small subunit)

Finemlucis_3

Finemlucis_4
(terminase large subunit)

Finemlucis_5
(portal protein)

Finemlucis_6
(capsid maturation protease)

Finemlucis_7
(scaffolding protein)

Finemlucis_8
(major capsid protein)

Finemlucis_9
(head-to-tail adaptor)

Finemlucis_10
(head-to-tail stopper)

Finemlucis_11

Finemlucis_12
(tail terminator)

Finemlucis_13
(major tail protein)

Finemlucis_14
(tail assembly chaperone)

Finemlucis_15
(tail assembly chaperone)

Finemlucis_16
(tape measure protein)

Finemlucis_17
(minor tail protein)

Finemlucis_18
(minor tail protein)

Finemlucis_19
(minor tail protein)

Finemlucis_20
(minor tail protein)

Finemlucis_21

Finemlucis_22

Finemlucis_23

Finemlucis_24
(minor tail protein)

Finemlucis_25

Finemlucis_26

Finemlucis_27
(lysin A)

Finemlucis_28
(lysin B)

Finemlucis_29

Finemlucis_30

Finemlucis_31

Finemlucis_32
(glutaredoxin)

Finemlucis_33

Finemlucis_34

Finemlucis_35
(nucleotidyltransferase)

Finemlucis_36
(DNA bridging protein)

Finemlucis_37

Finemlucis_38
(integrase)

Finemlucis_39

Finemlucis_40
(immunity repressor)

Finemlucis_41
(CRO protein)

Finemlucis_42

Finemlucis_43

Finemlucis_44

Finemlucis_45

Finemlucis_46

Finemlucis_47
(esterase)

Finemlucis_48

Finemlucis_49

Finemlucis_50

Finemlucis_51

Finemlucis_52
(band-7-like membrane protein)

Finemlucis_53

Finemlucis_54

Finemlucis_55
(RNA binding protein)

Finemlucis_56

Finemlucis_57

Finemlucis_58

Finemlucis_59

Finemlucis_60

Finemlucis_61

Finemlucis_62

Finemlucis_63
(ssDNA binding protein)

Finemlucis_64

Finemlucis_65

Finemlucis_66

Finemlucis_67
(HNH endonuclease)

Finemlucis_68

Finemlucis_69

Finemlucis_70

Finemlucis_71
(endonuclease VII)

Finemlucis_72

Finemlucis_73

Finemlucis_74
(phosphoribosyl pyrophosphate synthetase)

Finemlucis_75
(nicotinate ribosyltransferase)

Finemlucis_76
(polynucleotide kinase)

Finemlucis_77

Finemlucis_78

Finemlucis_79
(resolvase)

Finemlucis_80
(WhiB family transcription factor)

Finemlucis_81
(WhiB family transcription factor)

Finemlucis_82

Finemlucis_83

Finemlucis_84

Finemlucis_85
(ssDNA binding protein)

Finemlucis_86

Finemlucis_87

Finemlucis_88

Finemlucis_89
(RNA ligase)

Finemlucis_90

Finemlucis_91
(protease)

Finemlucis_92

Finemlucis_93

Finemlucis_94

Finemlucis_95

Finemlucis_96
(HNH endonuclease)

Finemlucis_97

Finemlucis_98

Finemlucis_99
(DNA polymerase III subunit)

Finemlucis_100

Finemlucis_101

Finemlucis_102
(HNH endonuclease)

Finemlucis_103

Finemlucis_104

Finemlucis_105

Finemlucis_107

Finemlucis_109

Finemlucis_115

Finemlucis_116

Finemlucis_118

Finemlucis_119

Finemlucis_121

Finemlucis_123

Finemlucis_124

Finemlucis_125

Finemlucis_126

Finemlucis_127

Finemlucis_128

Finemlucis_129

Finemlucis_130

Finemlucis_131

Finemlucis_132

Finemlucis_133

Finemlucis_134

Finemlucis_135

Finemlucis_136

Finemlucis_137
(AAA-ATPase)

Finemlucis_138

Finemlucis_139

Finemlucis_140

Finemlucis_141

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF185728
Refseq NumberNone yet
Published in PaperHerren et al. 2017, Genome Announcements: Genome Sequences of Four Subcluster L2 Mycobacterium Phages, Finemlucis, Miley16, Wilder, and Zakai
Archiving Info
Archiving status Archived
Pitt Freezer Box# 19
Pitt Freezer Box Grid# B10
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload