Mycobacterium phage Gabriela
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Detailed Information for Phage Gabriela
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCarlos Guerrero
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramUnavailable
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS Coordinates40.4406 N, 79.9959 W Map
Discovery NotesIsolated from pooled DOGEMS#2 lysate pool enriched with GD08
Naming NotesFormer designation cg_3
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 23, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1125
Genome length (bp)75383
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Gabriela_1

Gabriela_2
(terminase, small subunit)

Gabriela_3

Gabriela_4
(terminase, large subunit)

Gabriela_5
(portal protein)

Gabriela_6
(capsid maturation protease)

Gabriela_7
(scaffolding protein)

Gabriela_8
(major capsid protien)

Gabriela_9
(head-to-tail adaptor)

Gabriela_10
(head-to-tail stopper)

Gabriela_11

Gabriela_12
(tail terminator)

Gabriela_13
(major tail protein)

Gabriela_14
(tail assembly chaperone)

Gabriela_15
(tail assembly chaperone)

Gabriela_16
(tape measure protein)

Gabriela_17
(minor tail protein)

Gabriela_18
(minor tail protein)

Gabriela_19
(minor tail protein)

Gabriela_20
(minor tail protein)

Gabriela_21

Gabriela_22

Gabriela_23

Gabriela_24
(minor tail protein)

Gabriela_25

Gabriela_26

Gabriela_27
(lysin A)

Gabriela_28
(lysin B)

Gabriela_29

Gabriela_30
(glutaredoxin)

Gabriela_31

Gabriela_32

Gabriela_33

Gabriela_34

Gabriela_35
(nucleotidyl transferase)

Gabriela_36
(Lsr2-like DNA bridging protein)

Gabriela_37

Gabriela_38
(tyrosine integrase)

Gabriela_39
(membrane protein)

Gabriela_40
(immunity repressor)

Gabriela_41
(Cro (control of repressor's operator))

Gabriela_42
(excise)

Gabriela_43

Gabriela_44
(membrane protein)

Gabriela_45

Gabriela_46

Gabriela_47
(metallophosphoesterase)

Gabriela_48

Gabriela_49

Gabriela_50

Gabriela_51

Gabriela_52
(Ro-like RNA binding protein)

Gabriela_53

Gabriela_54

Gabriela_55

Gabriela_56

Gabriela_57

Gabriela_58
(Cas4 family exonuclease)

Gabriela_59

Gabriela_60
(ssDNA binding protein, ERF family)

Gabriela_61

Gabriela_62
(ParB-like nuclease domain)

Gabriela_63

Gabriela_64
(HNH endonuclease)

Gabriela_65

Gabriela_66

Gabriela_67
(DnaB-like dsDNA helicase)

Gabriela_68
(endonuclease VII)

Gabriela_69
(WhiB family transcription factor)

Gabriela_70

Gabriela_71

Gabriela_72
(phosphoribosyl transferase)

Gabriela_73
(endonuclease VII)

Gabriela_74
(nicotinate ribosyltransferase)

Gabriela_75
(polynucleotide kinase)

Gabriela_76

Gabriela_77

Gabriela_78

Gabriela_79
(RusA-like resolvase (endonuclease))

Gabriela_80
(WhiB family transcription factor)

Gabriela_81
(WhiB family transcription factor)

Gabriela_82

Gabriela_83

Gabriela_84

Gabriela_85
(ssDNA binding protein)

Gabriela_86
(toxin in toxin/antitoxin system, HicA-like)

Gabriela_87

Gabriela_88
(RNA ligase)

Gabriela_89

Gabriela_90
(ClpP-like protease)

Gabriela_91

Gabriela_92

Gabriela_93

Gabriela_94

Gabriela_95
(HNH endonuclease)

Gabriela_96

Gabriela_97

Gabriela_98
(DnaQ-like (DNA polymerase III subunit))

Gabriela_99

Gabriela_100

Gabriela_101
(HNH endonuclease)

Gabriela_102

Gabriela_103

Gabriela_104

Gabriela_106

Gabriela_110

Gabriela_111

Gabriela_117

Gabriela_118

Gabriela_119

Gabriela_120

Gabriela_122

Gabriela_124

Gabriela_125

Gabriela_126

Gabriela_127

Gabriela_128

Gabriela_129

Gabriela_130

Gabriela_131

Gabriela_132

Gabriela_133

Gabriela_134

Gabriela_135

Gabriela_136

Gabriela_137

Gabriela_138

Gabriela_139
(AAA-ATPase)

Gabriela_140

Gabriela_141

Gabriela_142

Gabriela_143

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN703406
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload