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Mycobacterium phage MsGreen
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Detailed Information for Phage MsGreen
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByNonhle Mkhwanazi
Year Found2015
Location FoundDurban, South Africa
Finding InstitutionUniversity of Kwazulu-Natal
ProgramMycobacterial Genetics Course, Durban, South Africa
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates29.9 S, 30.9 E Map
Discovery NotesThe soil was sampled in a backyard where my family hang washed laundry
Naming NotesMsGreen was named after a a weird luminous green snake with black stripes once seen near the spot where we hang dry washed laundry
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 17, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2367
Genome length (bp)75617
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content59.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL3
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesPin point clear plaques during the 1st 2 days of incubation. Halo plaques with 1mm diameter after 3 days
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

MsGreen_1

MsGreen_2

MsGreen_3

MsGreen_4

MsGreen_5
(terminase)

MsGreen_6
(portal protein)

MsGreen_7
(capsid maturation protease)

MsGreen_8
(scaffolding protein)

MsGreen_9
(major capsid protein)

MsGreen_10
(head-to-tail adaptor)

MsGreen_11
(head-to-tail stopper)

MsGreen_12

MsGreen_13
(tail terminator)

MsGreen_14
(major tail protein)

MsGreen_15
(tail assembly chaperone)

MsGreen_16
(tail assembly chaperone)

MsGreen_17
(tape measure protein)

MsGreen_18
(minor tail protein)

MsGreen_19
(minor tail protein)

MsGreen_20
(minor tail protein)

MsGreen_21
(minor tail protein)

MsGreen_22
(minor tail protein)

MsGreen_23

MsGreen_24

MsGreen_25

MsGreen_26
(lysin A)

MsGreen_27
(holin)

MsGreen_28
(lysin B)

MsGreen_29

MsGreen_30

MsGreen_31
(NrdH glutaredoxin)

MsGreen_32

MsGreen_33
(nucleotidyltransferase)

MsGreen_34
(Lsr2-like DNA bridging protein)

MsGreen_35

MsGreen_36
(integrase, (Y-int))

MsGreen_37

MsGreen_38

MsGreen_39
(helix-turn-helix DNA binding protein)

MsGreen_40
(excise)

MsGreen_41

MsGreen_42

MsGreen_43

MsGreen_44
(metallophosphoesterase)

MsGreen_45
(membrane protein, Band 7-like)

MsGreen_46

MsGreen_47

MsGreen_48

MsGreen_50

MsGreen_51

MsGreen_52

MsGreen_53

MsGreen_54
(RNA binding protein)

MsGreen_55

MsGreen_56

MsGreen_57

MsGreen_58

MsGreen_59

MsGreen_60

MsGreen_61

MsGreen_62
(ssDNA binding protein ERF family)

MsGreen_63
(ssDNA binding protein ERF family)

MsGreen_64

MsGreen_65

MsGreen_66
(HNH endonuclease)

MsGreen_67

MsGreen_68

MsGreen_69
(DNA helicase)

MsGreen_70

MsGreen_71

MsGreen_72

MsGreen_73

MsGreen_74
(phosphoribosyl-pyrophosphate transferase)

MsGreen_75
(nicotinate phosphoribosyl transferase)

MsGreen_76
(polynucleotide kinase)

MsGreen_77

MsGreen_78

MsGreen_79
(WhiB family transcription factor)

MsGreen_80
(WhiB family transcription factor)

MsGreen_81

MsGreen_82

MsGreen_83

MsGreen_84
(ssDNA binding protein)

MsGreen_85

MsGreen_86
(RNA ligase)

MsGreen_87
(ClpP protease)

MsGreen_88

MsGreen_89

MsGreen_90

MsGreen_91

MsGreen_92

MsGreen_93

MsGreen_94

MsGreen_95
(DnaQ exonuclease (DNA polymerase III subunit))

MsGreen_96

MsGreen_97

MsGreen_98

MsGreen_99

MsGreen_100

MsGreen_101

MsGreen_102

MsGreen_103

MsGreen_105

MsGreen_107

MsGreen_111

MsGreen_114

MsGreen_115

MsGreen_118

MsGreen_119

MsGreen_120

MsGreen_121

MsGreen_122

MsGreen_123

MsGreen_124

MsGreen_125

MsGreen_126

MsGreen_127

MsGreen_128

MsGreen_129

MsGreen_130

MsGreen_131

MsGreen_132

MsGreen_133

MsGreen_134

MsGreen_135
(AAA-ATPase)

MsGreen_136

MsGreen_137

MsGreen_138

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK878900
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# A11
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload