Detailed Information for Phage MsGreen |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Nonhle Mkhwanazi |
Year Found | 2015 |
Location Found | Durban, South Africa |
Finding Institution | University of Kwazulu-Natal |
Program | Mycobacterial Genetics Course, Durban, South Africa |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 29.9 S, 30.9 E Map |
Discovery Notes | The soil was sampled in a backyard where my family hang washed laundry |
Naming Notes | MsGreen was named after a a weird luminous green snake with black stripes once seen near the spot where we hang dry washed laundry |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 17, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2367 |
Genome length (bp) | 75617 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGATCAGCC |
GC Content | 59.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Pin point clear plaques during the 1st 2 days of incubation. Halo plaques with 1mm diameter after 3 days |
Morphotype | Siphoviridae |
Number of Genes | 128 |
Number of tRNAs | 10 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK878900 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
A11 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |