Mycobacterium phage Itos
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Detailed Information for Phage Itos
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCarlos Guerrero
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramUnavailable
From enriched soil sample?Unknown
Isolation Temperature37°C
GPS Coordinates40.4443 N, 79.9532 W Map
Discovery NotesIsolated from pooled lysates enrichment with M. abscessus GD08.
Naming Notesformer designation cg_11
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 23, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage124
Genome length (bp)74937
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Itos_1

Itos_2
(terminase small subunit)

Itos_3

Itos_4
(terminase large subunit)

Itos_5
(portal protein)

Itos_6
(capsid maturation protease)

Itos_7
(scaffolding protein)

Itos_8
(major capsid protein)

Itos_9
(head-to-tail adaptor)

Itos_10
(head-to-tail stopper)

Itos_11

Itos_12
(tail terminator)

Itos_13
(major tail protein)

Itos_14
(tail assembly chaperone)

Itos_15
(tail assembly chaperone)

Itos_16
(tape measure protein)

Itos_17
(minor tail protein)

Itos_18
(minor tail protein)

Itos_19
(minor tail protein)

Itos_20
(minor tail protein)

Itos_21

Itos_22

Itos_23

Itos_24
(minor tail protein)

Itos_25

Itos_26

Itos_27
(lysin A)

Itos_28
(lysin B)

Itos_29

Itos_30

Itos_31

Itos_32
(glutaredoxin)

Itos_33

Itos_34

Itos_35
(nucleotidyl transferase)

Itos_36
(Lsr2-like DNA bridging protein)

Itos_37

Itos_38
(tyrosine integrase)

Itos_39
(immunity repressor)

Itos_40
(Cro protein)

Itos_41
(excise)

Itos_42

Itos_43
(membrane protein)

Itos_44

Itos_45

Itos_46
(metallophosphoesterase)

Itos_47

Itos_48

Itos_49

Itos_50

Itos_51
(membrane protein)

Itos_52

Itos_53

Itos_54
(Ro-like RNA binding protein)

Itos_55

Itos_56

Itos_57

Itos_58

Itos_59

Itos_60
(Cas4 family exonuclease)

Itos_61

Itos_62
(ERF family ssDNA binding protein)

Itos_63

Itos_64
(ParB-like nuclease domain protein)

Itos_65

Itos_66
(HNH endonuclease)

Itos_67

Itos_68

Itos_69
(DnaB-like dsDNA helicase)

Itos_70
(WhiB family transcription factor)

Itos_71

Itos_72

Itos_73
(phosphoribosyl transferase)

Itos_74
(nicotinate ribosyltransferase)

Itos_75
(polynucleotide kinase)

Itos_76

Itos_77

Itos_78

Itos_79
(RusA-like resolvase)

Itos_80
(WhiB family transcription factor)

Itos_81
(WhiB family transcription factor)

Itos_82

Itos_83

Itos_84

Itos_85
(ssDNA binding protein)

Itos_86
(HicA-like toxin)

Itos_87

Itos_88
(RNA ligase)

Itos_89

Itos_90
(ClpP-like protease)

Itos_91

Itos_92

Itos_93

Itos_94

Itos_95
(HNH endonuclease)

Itos_96

Itos_97

Itos_98
(DNA polymerase III subunit)

Itos_99

Itos_100

Itos_101
(HNH endonuclease)

Itos_102

Itos_103

Itos_104

Itos_106

Itos_110

Itos_111

Itos_117

Itos_118

Itos_120

Itos_121

Itos_123

Itos_125

Itos_126

Itos_127

Itos_128

Itos_129

Itos_130

Itos_131

Itos_132

Itos_133

Itos_134

Itos_135

Itos_136

Itos_137

Itos_138

Itos_139
(AAA-ATPase)

Itos_140

Itos_141

Itos_142

Itos_143

Itos_144

Itos_145

Itos_146

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN703410
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload