Mycobacterium phage Zaria
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Detailed Information for Phage Zaria
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByPhilleon Chambers
Year Found2016
Location FoundAtlanta, GA USA
Finding InstitutionMorehouse College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates33.746647 N, 84.413939 W Map
Discovery NotesPCR Primer cluster assignment: B5
Naming NotesName after one of Africa's well known Queens
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1668
Genome length (bp)74365
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGAACGGCC
GC Content58.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesClear, size ranged from 1 mm-2 miller-meters, edge of phage vary in clearness as in visibility of a define edges from lightly fade to clean cut
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Zaria_1

Zaria_2
(terminase, small subunit)

Zaria_3

Zaria_4
(terminase, large subunit)

Zaria_5
(portal protein)

Zaria_6
(capsid maturation protease)

Zaria_7
(scaffolding protein)

Zaria_8
(major capsid protein)

Zaria_9
(head-to-tail adaptor)

Zaria_10
(head-to-tail stopper)

Zaria_11

Zaria_12
(tail terminator)

Zaria_13
(major tail protein)

Zaria_14
(tail assembly chaperone)

Zaria_15
(tail assembly chaperone)

Zaria_16
(tape measure protein)

Zaria_17
(minor tail protein)

Zaria_18
(minor tail protein)

Zaria_19

Zaria_20
(minor tail protein)

Zaria_21
(minor tail protein)

Zaria_22

Zaria_23

Zaria_24

Zaria_25
(lysin A)

Zaria_26
(lysin B)

Zaria_27

Zaria_28
(membrane protein)

Zaria_29
(membrane protein)

Zaria_30
(NrdH-like glutaredoxin)

Zaria_31

Zaria_32
(Nucleotidyl transferase)

Zaria_33
(Lsr2-like DNA bridging protein)

Zaria_34

Zaria_35

Zaria_36
(tyrosine integrase)

Zaria_37
(membrane protein)

Zaria_38
(immunity repressor)

Zaria_39
(Cro (control of repressor's operator))

Zaria_40
(excise)

Zaria_41

Zaria_42

Zaria_43

Zaria_44

Zaria_45

Zaria_46
(metallophosphoesterase)

Zaria_47

Zaria_48

Zaria_49

Zaria_50

Zaria_51

Zaria_52

Zaria_53

Zaria_54

Zaria_55

Zaria_56

Zaria_57

Zaria_58

Zaria_59

Zaria_60
(Cas4 family exonuclease)

Zaria_61
(helix-turn-helix DNA binding domain protein)

Zaria_62
(ssDNA binding protein, ERF family)

Zaria_63

Zaria_64

Zaria_65

Zaria_66
(membrane protein)

Zaria_67

Zaria_68

Zaria_69
(DnaB-like dsDNA helicase)

Zaria_70
(WhiB family transcription factor)

Zaria_71

Zaria_72

Zaria_73
(phsophoribosyl transferase)

Zaria_74
(nicotinate ribosyltransferase)

Zaria_75

Zaria_76
(polynucleotide kinase)

Zaria_77

Zaria_78
(RusA-like resolvase (endonuclease))

Zaria_79
(WhiB family transcription factor)

Zaria_80
(WhiB family transcription factor)

Zaria_81

Zaria_82

Zaria_83
(ssDNA binding protein)

Zaria_84
(toxin in toxin/antitoxin system, HicA-like)

Zaria_85

Zaria_86
(RNA ligase)

Zaria_87

Zaria_88

Zaria_89

Zaria_90

Zaria_91
(HNH endonuclease)

Zaria_92

Zaria_93

Zaria_94
(DnaQ-like (DNA polymerase III subunit))

Zaria_95

Zaria_96

Zaria_97

Zaria_98

Zaria_99
(HNH endonuclease)

Zaria_100

Zaria_101

Zaria_102

Zaria_103

Zaria_104

Zaria_107

Zaria_110

Zaria_114

Zaria_115

Zaria_116

Zaria_117

Zaria_120

Zaria_121

Zaria_122

Zaria_123

Zaria_124

Zaria_125

Zaria_126

Zaria_127

Zaria_128

Zaria_129

Zaria_130

Zaria_131

Zaria_132

Zaria_133
(AAA-ATPase)

Zaria_134

Zaria_135

Zaria_136

Zaria_137

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586023
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 40
Pitt Freezer Box Grid# A5
Available Files
GenBank File for PhameratorDownload