Mycobacterium phage MkaliMitinis3
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Detailed Information for Phage MkaliMitinis3
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByGretchen Peppers
Year Found2011
Location FoundNew Orleans, LA USA
Finding InstitutionXavier University of Louisiana
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.99025 N, 90.097778 W Map
Discovery NotesTree roots submerged in the soil; Moderately moist soil; 77°F, Partly Sunny, No Clouds.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 21, 2012
Sequencing FacilityVirginia Commonwealth University Nucleic Acids Research Facilities
Shotgun Sequencing Method454 Pyrosequencing
Genome length (bp)75844
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusIn GenBank
Plaque Notes0.8 mm in Diameter; Little to no turbidity; No variation
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

MkaliMitinis3_1

MkaliMitinis3_2
(terminase small subunit)

MkaliMitinis3_3

MkaliMitinis3_4
(terminase large subunit)

MkaliMitinis3_5
(portal protein)

MkaliMitinis3_6
(capsid maturation protease)

MkaliMitinis3_7
(scaffolding protein)

MkaliMitinis3_8
(major capsid protein)

MkaliMitinis3_9
(head-to-tail connector)

MkaliMitinis3_10
(head-to-tail connector)

MkaliMitinis3_11
(head-to-tail connector)

MkaliMitinis3_12
(head-to-tail connector)

MkaliMitinis3_13
(major tail subunit)

MkaliMitinis3_14
(tail assembly chaperone)

MkaliMitinis3_15
(tail assembly chaperone)

MkaliMitinis3_16
(tape measure)

MkaliMitinis3_17
(minor tail protein)

MkaliMitinis3_18
(minor tail protein)

MkaliMitinis3_19
(minor tail protein)

MkaliMitinis3_20
(minor tail protein)

MkaliMitinis3_21
(minor tail protein)

MkaliMitinis3_22
(minor tail protein)

MkaliMitinis3_23
(minor tail protein)

MkaliMitinis3_24
(minor tail protein)

MkaliMitinis3_25

MkaliMitinis3_26

MkaliMitinis3_27
(lysin A)

MkaliMitinis3_28
(lysin B)

MkaliMitinis3_29

MkaliMitinis3_30

MkaliMitinis3_31

MkaliMitinis3_32
(glutaredoxin)

MkaliMitinis3_33

MkaliMitinis3_34

MkaliMitinis3_35
(nucleotidyltransferase)

MkaliMitinis3_36
(DNA bridging protein)

MkaliMitinis3_37

MkaliMitinis3_38
(integrase)

MkaliMitinis3_39

MkaliMitinis3_40
(immunity repressor)

MkaliMitinis3_41
(CRO protein)

MkaliMitinis3_42
(excise)

MkaliMitinis3_43

MkaliMitinis3_44

MkaliMitinis3_45

MkaliMitinis3_46

MkaliMitinis3_47
(esterase)

MkaliMitinis3_48

MkaliMitinis3_49

MkaliMitinis3_50

MkaliMitinis3_51

MkaliMitinis3_52

MkaliMitinis3_53

MkaliMitinis3_54

MkaliMitinis3_55

MkaliMitinis3_56

MkaliMitinis3_57

MkaliMitinis3_58

MkaliMitinis3_59

MkaliMitinis3_60

MkaliMitinis3_61

MkaliMitinis3_62

MkaliMitinis3_63

MkaliMitinis3_64
(ssDNA binding protein)

MkaliMitinis3_65

MkaliMitinis3_66

MkaliMitinis3_67

MkaliMitinis3_68
(HNH endonuclease)

MkaliMitinis3_69

MkaliMitinis3_70

MkaliMitinis3_71
(dsDNA helicase)

MkaliMitinis3_72

MkaliMitinis3_73

MkaliMitinis3_74

MkaliMitinis3_75
(phosphoribosyl pyrophosphate transferase)

MkaliMitinis3_76
(nicotinate ribosyltransferase)

MkaliMitinis3_77
(polynucleotide kinase)

MkaliMitinis3_78

MkaliMitinis3_79

MkaliMitinis3_80

MkaliMitinis3_81
(resolvase)

MkaliMitinis3_82
(WhiB family transcription factor)

MkaliMitinis3_83
(WhiB family transcription factor)

MkaliMitinis3_84

MkaliMitinis3_85

MkaliMitinis3_86
(ssDNA binding protein)

MkaliMitinis3_87

MkaliMitinis3_88

MkaliMitinis3_89

MkaliMitinis3_90
(RNA ligase)

MkaliMitinis3_91

MkaliMitinis3_92
(ClpP protease)

MkaliMitinis3_93

MkaliMitinis3_94

MkaliMitinis3_95

MkaliMitinis3_96

MkaliMitinis3_97
(HNH endonuclease)

MkaliMitinis3_98

MkaliMitinis3_99

MkaliMitinis3_100
(DNA polymerase III subunit)

MkaliMitinis3_101

MkaliMitinis3_102
(HNH endonuclease)

MkaliMitinis3_103

MkaliMitinis3_104

MkaliMitinis3_105

MkaliMitinis3_106

MkaliMitinis3_107

MkaliMitinis3_109

MkaliMitinis3_110

MkaliMitinis3_113

MkaliMitinis3_120

MkaliMitinis3_121

MkaliMitinis3_123

MkaliMitinis3_125

MkaliMitinis3_127

MkaliMitinis3_128

MkaliMitinis3_129

MkaliMitinis3_130

MkaliMitinis3_131

MkaliMitinis3_132

MkaliMitinis3_133

MkaliMitinis3_134

MkaliMitinis3_135

MkaliMitinis3_136

MkaliMitinis3_137

MkaliMitinis3_138

MkaliMitinis3_139

MkaliMitinis3_140
(AAA ATPase)

MkaliMitinis3_141

MkaliMitinis3_142

MkaliMitinis3_143

MkaliMitinis3_144

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU234099
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
SEA Designator XUVA
Pitt Freezer Box# 31
Pitt Freezer Box Grid# 24
Available Files
EM PictureDownload
Final DNAMaster FileDownload