Mycobacterium phage Calm
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Calm
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCaleb Mincheff
Year Found2022
Location FoundBlacksburg, VA United States
Finding InstitutionVirginia Tech
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates37.2254 N, 80.4464 W Map
Discovery NotesCalm was found from a flower bed off of a walking trail in Blacksburg, Virginia. The dirt collected was roughly 6 cm down under some mulch. The flower bed was a shaded area and very moist dirt was collected.
Naming NotesThe name was derived from the name of the individual who found the phage, Caleb Mincheff. The name of the phage is the first 3 letters of his first name and the last name initial.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 4, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1007
Genome length (bp)74900
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGAACGGCC
GC Content58.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionVirginia Tech
Annotation StatusBeing Annotated (Expected completion by 5/1/2023)
Plaque NotesRound and clear medium sized plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Calm_Draft_1

Calm_Draft_2

Calm_Draft_3

Calm_Draft_4

Calm_Draft_5

Calm_Draft_6

Calm_Draft_7

Calm_Draft_8

Calm_Draft_9

Calm_Draft_10

Calm_Draft_11

Calm_Draft_12

Calm_Draft_13

Calm_Draft_14

Calm_Draft_15

Calm_Draft_16

Calm_Draft_17

Calm_Draft_18

Calm_Draft_19

Calm_Draft_20

Calm_Draft_21

Calm_Draft_22

Calm_Draft_23

Calm_Draft_24

Calm_Draft_25

Calm_Draft_26

Calm_Draft_27

Calm_Draft_28

Calm_Draft_29

Calm_Draft_30

Calm_Draft_31

Calm_Draft_32

Calm_Draft_33

Calm_Draft_34

Calm_Draft_35

Calm_Draft_36

Calm_Draft_37

Calm_Draft_38

Calm_Draft_39

Calm_Draft_40

Calm_Draft_41

Calm_Draft_42

Calm_Draft_44

Calm_Draft_45

Calm_Draft_46

Calm_Draft_47

Calm_Draft_48

Calm_Draft_49

Calm_Draft_50

Calm_Draft_51

Calm_Draft_52

Calm_Draft_53

Calm_Draft_54

Calm_Draft_55

Calm_Draft_56

Calm_Draft_57

Calm_Draft_58

Calm_Draft_59

Calm_Draft_60

Calm_Draft_61

Calm_Draft_62

Calm_Draft_63

Calm_Draft_64

Calm_Draft_65

Calm_Draft_66

Calm_Draft_67

Calm_Draft_68

Calm_Draft_69

Calm_Draft_70

Calm_Draft_71

Calm_Draft_72

Calm_Draft_73

Calm_Draft_74

Calm_Draft_75

Calm_Draft_76

Calm_Draft_77

Calm_Draft_78

Calm_Draft_79

Calm_Draft_80

Calm_Draft_81

Calm_Draft_82

Calm_Draft_83

Calm_Draft_84

Calm_Draft_85

Calm_Draft_86

Calm_Draft_87

Calm_Draft_88

Calm_Draft_89

Calm_Draft_90

Calm_Draft_91

Calm_Draft_92

Calm_Draft_93

Calm_Draft_94

Calm_Draft_95

Calm_Draft_96

Calm_Draft_97

Calm_Draft_98

Calm_Draft_99

Calm_Draft_100

Calm_Draft_101

Calm_Draft_102

Calm_Draft_103

Calm_Draft_106

Calm_Draft_109

Calm_Draft_114

Calm_Draft_115

Calm_Draft_117

Calm_Draft_118

Calm_Draft_121

Calm_Draft_122

Calm_Draft_123

Calm_Draft_124

Calm_Draft_125

Calm_Draft_126

Calm_Draft_127

Calm_Draft_128

Calm_Draft_129

Calm_Draft_130

Calm_Draft_131

Calm_Draft_132

Calm_Draft_133

Calm_Draft_134

Calm_Draft_135

Calm_Draft_136

Calm_Draft_137

Calm_Draft_138

Calm_Draft_139

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 153
Pitt Freezer Box Grid# E8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload