Mycobacterium phage DyoEdafos
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Detailed Information for Phage DyoEdafos
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByOziel Salazar and Brianna Dartt
Year Found2015
Location FoundHouston, TX USA
Finding InstitutionUniversity of Houston-Downtown
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.7604 N, 95.3698 W Map
Naming NotesDyaEdafos means two soils. This phage was isolated by mixing two soil samples.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 26, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1986
Genome length (bp)77566
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL4
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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DyoEdafos_1
(terminase, small subunit)

DyoEdafos_2

DyoEdafos_3

DyoEdafos_4

DyoEdafos_5
(terminase, large subunit)

DyoEdafos_6
(portal protein)

DyoEdafos_7
(MuF-like minor capsid protein)

DyoEdafos_8

DyoEdafos_9
(major capsid protein)

DyoEdafos_10
(head-to-tail adaptor)

DyoEdafos_11

DyoEdafos_12

DyoEdafos_13

DyoEdafos_14
(major tail protein)

DyoEdafos_15
(tail assembly chaperone)

DyoEdafos_16
(tail assembly chaperone)

DyoEdafos_17
(tape measure protein)

DyoEdafos_18
(minor tail protein)

DyoEdafos_19
(minor tail protein)

DyoEdafos_20

DyoEdafos_21
(minor tail protein)

DyoEdafos_22
(minor tail protein)

DyoEdafos_23

DyoEdafos_24
(minor tail protein)

DyoEdafos_25

DyoEdafos_26
(lysin A)

DyoEdafos_27
(lysin B)

DyoEdafos_28

DyoEdafos_29
(holin)

DyoEdafos_30
(membrane protein)

DyoEdafos_31
(NrdH-like glutaredoxin)

DyoEdafos_32

DyoEdafos_33
(nucleotidyl transferase)

DyoEdafos_34
(Lsr2-like DNA bridging protein)

DyoEdafos_35

DyoEdafos_36

DyoEdafos_37
(tyrosine integrase)

DyoEdafos_38
(membrane protein)

DyoEdafos_39
(immunity repressor)

DyoEdafos_40
(Cro (control of repressor s operator))

DyoEdafos_41
(excise)

DyoEdafos_42

DyoEdafos_43
(membrane protein)

DyoEdafos_44

DyoEdafos_45

DyoEdafos_46
(metallophosphoesterase)

DyoEdafos_47

DyoEdafos_48

DyoEdafos_49

DyoEdafos_50
(membrane protein)

DyoEdafos_51

DyoEdafos_52

DyoEdafos_53

DyoEdafos_54

DyoEdafos_55
(Ro-like RNA binding protein)

DyoEdafos_56

DyoEdafos_57

DyoEdafos_58

DyoEdafos_59
(membrane protein)

DyoEdafos_60

DyoEdafos_61
(Cas4 family exonuclease)

DyoEdafos_62
(helix-turn-helix DNA binding domain protein)

DyoEdafos_63
(ssDNA binding protein, ERF family)

DyoEdafos_64

DyoEdafos_65

DyoEdafos_66
(ParB-like nuclease domain)

DyoEdafos_67

DyoEdafos_68

DyoEdafos_69
(HNH endonuclease)

DyoEdafos_70

DyoEdafos_71

DyoEdafos_72

DyoEdafos_73
(DnaB-like dsDNA helicase)

DyoEdafos_74
(WhiB family transcription factor)

DyoEdafos_75

DyoEdafos_76

DyoEdafos_77
(phosphoribosyl-pyrophosphate synthetase)

DyoEdafos_78

DyoEdafos_79
(nicotinate ribosyltransferase)

DyoEdafos_80
(polynucleotide kinase)

DyoEdafos_81

DyoEdafos_82
(RusA-like resolvase (endonuclease))

DyoEdafos_83
(WhiB family transcription factor)

DyoEdafos_84
(WhiB family transcription factor)

DyoEdafos_85

DyoEdafos_86

DyoEdafos_87
(ssDNA binding protein)

DyoEdafos_88

DyoEdafos_89
(DNA binding protein)

DyoEdafos_90

DyoEdafos_91
(RNA ligase)

DyoEdafos_92

DyoEdafos_93
(ClpP-like protease)

DyoEdafos_94

DyoEdafos_95

DyoEdafos_96
(helix-turn-helix DNA binding domain protein)

DyoEdafos_97

DyoEdafos_98
(HNH endonuclease)

DyoEdafos_99

DyoEdafos_100

DyoEdafos_101
(DnaQ exonuclease (DNA polymerase III subunit))

DyoEdafos_102

DyoEdafos_103

DyoEdafos_104
(helix-turn-helix DNA binding domain protein)

DyoEdafos_105
(HNH endonuclease)

DyoEdafos_106

DyoEdafos_107

DyoEdafos_108

DyoEdafos_109

DyoEdafos_110

DyoEdafos_111
(membrane protein)

DyoEdafos_112

DyoEdafos_114

DyoEdafos_115

DyoEdafos_118

DyoEdafos_119

DyoEdafos_128

DyoEdafos_129

DyoEdafos_131
(membrane protein)

DyoEdafos_132

DyoEdafos_134

DyoEdafos_136

DyoEdafos_137

DyoEdafos_138

DyoEdafos_139

DyoEdafos_140

DyoEdafos_141

DyoEdafos_142

DyoEdafos_143

DyoEdafos_144

DyoEdafos_145

DyoEdafos_146

DyoEdafos_147

DyoEdafos_148

DyoEdafos_149

DyoEdafos_150

DyoEdafos_151

DyoEdafos_152
(AAA-ATPase)

DyoEdafos_153

DyoEdafos_154

DyoEdafos_155
(membrane protein)

DyoEdafos_156

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234187
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 25
Pitt Freezer Box Grid# C10
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload