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Mycobacterium phage DrSeegs
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Detailed Information for Phage DrSeegs
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAddison Lay
Year Found2020
Location FoundLewistown, MO United States
Finding InstitutionCulver-Stockton College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates40.081182 N, 91.81485 W Map
Discovery NotesThe soil sample was collected under a large tree, and it had been raining the night prior. A shovel was used to remove the top layer of soil in order to collect the sample
Naming NotesThe phage is named for the professor of the class in which it was discovered
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 22, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage210
Genome length (bp)76652
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCulver-Stockton College
Annotation StatusIn GenBank
Plaque NotesLytic, 1.5mm diameter
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

DrSeegs_1

DrSeegs_2
(terminase small subunit)

DrSeegs_3

DrSeegs_4
(terminase large subunit)

DrSeegs_5
(portal protein)

DrSeegs_6
(MuF-like minor capsid protein)

DrSeegs_7
(scaffolding protein)

DrSeegs_8
(major capsid protein)

DrSeegs_9
(head-to-tail adaptor)

DrSeegs_10
(head-to-tail stopper)

DrSeegs_11

DrSeegs_12
(tail terminator)

DrSeegs_13
(major tail protein)

DrSeegs_14
(tail assembly chaperone)

DrSeegs_15
(tail assembly chaperone)

DrSeegs_16
(tape measure protein)

DrSeegs_17
(minor tail protein)

DrSeegs_18
(minor tail protein)

DrSeegs_19

DrSeegs_20
(minor tail protein)

DrSeegs_21

DrSeegs_22

DrSeegs_23

DrSeegs_24
(minor tail protein)

DrSeegs_25

DrSeegs_26

DrSeegs_27
(lysin A)

DrSeegs_28
(lysin B)

DrSeegs_29

DrSeegs_30

DrSeegs_31

DrSeegs_32
(NrdH-like glutaredoxin)

DrSeegs_33

DrSeegs_34

DrSeegs_35
(nucleotidyl transferase)

DrSeegs_36
(Lsr2-like DNA bridging protein)

DrSeegs_37

DrSeegs_38
(tyrosine integrase)

DrSeegs_39

DrSeegs_40
(immunity repressor)

DrSeegs_41
(Cro protein)

DrSeegs_42
(excise)

DrSeegs_43

DrSeegs_44

DrSeegs_45

DrSeegs_46

DrSeegs_47
(esterase)

DrSeegs_48

DrSeegs_49

DrSeegs_50

DrSeegs_51

DrSeegs_52

DrSeegs_53

DrSeegs_54

DrSeegs_55
(Ro-like RNA binding protein)

DrSeegs_56

DrSeegs_57

DrSeegs_58

DrSeegs_59

DrSeegs_60

DrSeegs_61
(Cas4 family exonuclease)

DrSeegs_62

DrSeegs_63
(ERF family ssDNA binding protein)

DrSeegs_64

DrSeegs_65
(ParB-like nuclease domain protein)

DrSeegs_66

DrSeegs_67

DrSeegs_68

DrSeegs_69

DrSeegs_70
(DnaB-like dsDNA helicase)

DrSeegs_71
(WhiB family transcription factor)

DrSeegs_72

DrSeegs_73

DrSeegs_74
(phosphoribosyl pyrophosphate transferase)

DrSeegs_75
(nicotinate ribosyltransferase)

DrSeegs_76
(polynucleotide kinase)

DrSeegs_77

DrSeegs_78

DrSeegs_79

DrSeegs_80
(RusA-like resolvase)

DrSeegs_81
(WhiB family transcription factor)

DrSeegs_82
(WhiB family transcription factor)

DrSeegs_83

DrSeegs_84

DrSeegs_85
(ssDNA binding protein)

DrSeegs_86

DrSeegs_87
(RNA ligase)

DrSeegs_88
(HNH endonuclease)

DrSeegs_89
(ClpP-like protease)

DrSeegs_90

DrSeegs_91

DrSeegs_92

DrSeegs_93

DrSeegs_94
(HNH endonuclease)

DrSeegs_95

DrSeegs_96

DrSeegs_97
(DnaQ-like DNA polymerase III subunit)

DrSeegs_98

DrSeegs_99

DrSeegs_100
(HNH endonuclease)

DrSeegs_101

DrSeegs_102

DrSeegs_103

DrSeegs_105

DrSeegs_109

DrSeegs_115

DrSeegs_116

DrSeegs_118

DrSeegs_119

DrSeegs_121

DrSeegs_123

DrSeegs_124

DrSeegs_125

DrSeegs_126

DrSeegs_127

DrSeegs_128

DrSeegs_129

DrSeegs_130

DrSeegs_131

DrSeegs_132

DrSeegs_133

DrSeegs_134

DrSeegs_135

DrSeegs_136
(AAA-ATPase)

DrSeegs_137

DrSeegs_138

DrSeegs_139

DrSeegs_140

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ171373
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.7 x 10^10 pfu/mL
Pitt Freezer Box# 120
Pitt Freezer Box Grid# G11
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload