Mycobacterium phage Vetrix
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Detailed Information for Phage Vetrix
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByNatnael Belay
Year Found2020
Location FoundHolland, MI United States
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates42.791667 N, 86.105 W Map
Discovery NotesThe phage was discovered from the soil within a plant base 3 inches deep, there were white particles within the soil.
Naming NotesVetrix is a scientist from an old show about astrophysics.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage630
Genome length (bp)76520
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionHope College
Annotation StatusIn GenBank
Plaque NotesThe plaque seemed somewhat turbid, the size was roughly 1-2mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Vetrix_1

Vetrix_2
(terminase small subunit)

Vetrix_3

Vetrix_4
(terminase large subunit)

Vetrix_5
(portal protein)

Vetrix_6

Vetrix_7
(scaffolding protein)

Vetrix_8
(major capsid protein)

Vetrix_9
(head-to-tail adaptor)

Vetrix_10
(head-to-tail stopper)

Vetrix_11

Vetrix_12
(tail terminator)

Vetrix_13
(major tail protein)

Vetrix_14
(tail assembly chaperone)

Vetrix_15
(tail assembly chaperone)

Vetrix_16
(tape measure protein)

Vetrix_17
(minor tail protein)

Vetrix_18
(minor tail protein)

Vetrix_19
(minor tail protein)

Vetrix_20
(minor tail protein)

Vetrix_21
(minor tail protein)

Vetrix_22

Vetrix_23

Vetrix_24
(minor tail protein)

Vetrix_25

Vetrix_26

Vetrix_27
(lysin A)

Vetrix_28
(lysin B)

Vetrix_29

Vetrix_30

Vetrix_31

Vetrix_32
(glutaredoxin)

Vetrix_33

Vetrix_34

Vetrix_35
(nucleotidyl transferase)

Vetrix_36
(Lsr2-like DNA bridging protein)

Vetrix_37

Vetrix_38
(tyrosine integrase)

Vetrix_39

Vetrix_40
(immunity repressor)

Vetrix_41
(Cro protein)

Vetrix_42
(excise)

Vetrix_43

Vetrix_44

Vetrix_45

Vetrix_46

Vetrix_47
(esterase)

Vetrix_48

Vetrix_49

Vetrix_50

Vetrix_51

Vetrix_52
(band-7-like membrane protein)

Vetrix_53

Vetrix_54
(lipoprotein)

Vetrix_55
(Ro-like RNA binding protein)

Vetrix_56

Vetrix_57

Vetrix_58

Vetrix_59

Vetrix_60

Vetrix_61
(Cas4 family exonuclease)

Vetrix_62

Vetrix_63
(ERF family ssDNA binding protein)

Vetrix_64

Vetrix_65
(ParB-like nuclease domain protein)

Vetrix_66

Vetrix_67
(HNH endonuclease)

Vetrix_68

Vetrix_69

Vetrix_70
(DnaB-like dsDNA helicase)

Vetrix_71
(WhiB family transcription factor)

Vetrix_72

Vetrix_73

Vetrix_74

Vetrix_75
(nicotinate ribosyltransferase)

Vetrix_76
(polynucleotide kinase)

Vetrix_77

Vetrix_78

Vetrix_79
(RusA-like resolvase)

Vetrix_80
(WhiB family transcription factor)

Vetrix_81
(WhiB family transcription factor)

Vetrix_82

Vetrix_83

Vetrix_84
(ssDNA binding protein)

Vetrix_85

Vetrix_86

Vetrix_87
(RNA ligase)

Vetrix_88
(ClpP-like protease)

Vetrix_89

Vetrix_90

Vetrix_91

Vetrix_92

Vetrix_93
(HNH endonuclease)

Vetrix_94

Vetrix_95

Vetrix_96
(DnaQ-like DNA polymerase III subunit)

Vetrix_97

Vetrix_98

Vetrix_99
(HNH endonuclease)

Vetrix_100
(endonuclease VII)

Vetrix_101

Vetrix_102

Vetrix_103

Vetrix_105

Vetrix_107
(HNH endonuclease)

Vetrix_109

Vetrix_110

Vetrix_116

Vetrix_117

Vetrix_119

Vetrix_120

Vetrix_122

Vetrix_124

Vetrix_125

Vetrix_126

Vetrix_127

Vetrix_128

Vetrix_129

Vetrix_130

Vetrix_131

Vetrix_132

Vetrix_133

Vetrix_134

Vetrix_135

Vetrix_136

Vetrix_137

Vetrix_138
(AAA-ATPase)

Vetrix_139

Vetrix_140

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOL455899
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 117
Pitt Freezer Box Grid# C5
Available Files
GenBank File for PhameratorDownload