Mycobacterium phage BobsGarage
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Detailed Information for Phage BobsGarage
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesTheBob
Found ByLexi Marx
Year Found2016
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.49153 N, 80.034324 W Map
Discovery NotesSoil dampened by morning dew, found at edge of woods near a bird feeder.
Naming NotesThis phage is named after Bob Serpa.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 26, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage175
Genome length (bp)68102
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content58.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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BobsGarage_1

BobsGarage_2
(terminase small subunit)

BobsGarage_3

BobsGarage_4
(terminase large subunit)

BobsGarage_5
(portal protein)

BobsGarage_6
(MuF-like minor capsid protein)

BobsGarage_7
(scaffolding protein)

BobsGarage_8
(major capsid protein)

BobsGarage_9
(head-to-tail adaptor)

BobsGarage_10
(head-to-tail stopper)

BobsGarage_11

BobsGarage_12
(tail terminator)

BobsGarage_13
(major tail protein)

BobsGarage_14
(tail assembly chaperone)

BobsGarage_15
(tail assembly chaperone)

BobsGarage_16
(tapemeasure protein)

BobsGarage_17
(minor tail protein)

BobsGarage_18
(minor tail protein)

BobsGarage_19
(minor tail protein)

BobsGarage_20
(minor tail protein)

BobsGarage_21

BobsGarage_22

BobsGarage_23

BobsGarage_24
(minor tail protein)

BobsGarage_25

BobsGarage_26

BobsGarage_27
(lysin A)

BobsGarage_28
(lysin B)

BobsGarage_29

BobsGarage_30

BobsGarage_31

BobsGarage_32
(NrdH-like glutaredoxin)

BobsGarage_33

BobsGarage_34

BobsGarage_35
(nucleotidyltransferase)

BobsGarage_36
(Lsr2-like DNA bridging protein)

BobsGarage_37

BobsGarage_38
(serine integrase)

BobsGarage_39

BobsGarage_40
(immunity repressor)

BobsGarage_41
(Cro protein)

BobsGarage_42
(excise)

BobsGarage_43

BobsGarage_44

BobsGarage_45

BobsGarage_46

BobsGarage_47
(metallophosphoesterase)

BobsGarage_48

BobsGarage_49

BobsGarage_50

BobsGarage_51

BobsGarage_52

BobsGarage_53

BobsGarage_54

BobsGarage_55
(Ro-like RNA binding protein)

BobsGarage_56

BobsGarage_57

BobsGarage_58

BobsGarage_59

BobsGarage_60

BobsGarage_61
(Cas4 family exonuclease)

BobsGarage_62

BobsGarage_63
(ERF family ssDNA binding protein)

BobsGarage_64

BobsGarage_65
(ParB-like nuclease domain protein)

BobsGarage_66

BobsGarage_67
(HNH endonuclease)

BobsGarage_68

BobsGarage_69

BobsGarage_70
(DnaB-like DNA helicase)

BobsGarage_71
(WhiB family transcription factor)

BobsGarage_72

BobsGarage_73

BobsGarage_74
(phosphoribosyl transferase)

BobsGarage_75
(nicotinate ribosyltransferase)

BobsGarage_76
(polynucleotide kinase)

BobsGarage_77

BobsGarage_78

BobsGarage_79

BobsGarage_80
(RusA-like resolvase)

BobsGarage_81
(WhiB family transcription factor)

BobsGarage_82
(WhiB family transcription factor)

BobsGarage_83

BobsGarage_84

BobsGarage_85
(ssDNA binding protein)

BobsGarage_86
(HicA-like antitoxin)

BobsGarage_87
(RNA ligase)

BobsGarage_88
(HNH endonuclease)

BobsGarage_89
(ClpP-like protease)

BobsGarage_90

BobsGarage_91

BobsGarage_92

BobsGarage_93

BobsGarage_94
(HNH endonuclease)

BobsGarage_95

BobsGarage_96

BobsGarage_97
(exonuclease)

BobsGarage_98

BobsGarage_99

BobsGarage_100
(HNH endonuclease)

BobsGarage_101

BobsGarage_102

BobsGarage_103

BobsGarage_105

BobsGarage_109

BobsGarage_110

BobsGarage_116

BobsGarage_117

BobsGarage_119

BobsGarage_120

BobsGarage_122

BobsGarage_124

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586030
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# E1
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload