Detailed Information for Phage BoyNamedSue |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | Sydney Clark |
Year Found | 2018 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 18°C |
GPS Coordinates | 40.444364 N, 79.952489 W Map |
Naming Notes | Named after a Johnny Cash song. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 10, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1503 |
Genome length (bp) | 52698 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGCTGGGGA |
GC Content | 66.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CZ |
Subcluster | CZ1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Mitchell Community College |
Annotation Status | In GenBank |
Plaque Notes | Prolate Capsid |
Morphotype | Siphoviridae |
Number of Genes | 82 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW712717 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
89 |
Pitt Freezer Box Grid# |
H1 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |