Mycobacterium phage DuncansLeg
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Detailed Information for Phage DuncansLeg
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKaitlynn Burbage
Year Found2021
Location FoundConway, SC United States of America
Finding InstitutionCoastal Carolina University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates33.7993 N, 79.0138 W Map
Discovery Notesloamy soil, moist, plant roots, top of soil, dark brown
Naming NotesNamed after pet cat, Duncan, who got one of his legs amputated
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage677
Genome length (bp)75593
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCGATCAGCC
GC Content59.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterL
SubclusterL3
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCoastal Carolina University
Annotation StatusIn GenBank
Plaque Notesmedium, circular, uniform
MorphotypeSiphoviridae
Number of Genes126
Number of tRNAs10
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

DuncansLeg_1

DuncansLeg_2
(terminase small subunit)

DuncansLeg_3

DuncansLeg_4

DuncansLeg_5
(terminase large subunit)

DuncansLeg_6
(portal protein)

DuncansLeg_7
(capsid maturation protease)

DuncansLeg_8
(scaffolding protein)

DuncansLeg_9
(major capsid protein)

DuncansLeg_10
(head-to-tail adaptor)

DuncansLeg_11
(head-to-tail stopper)

DuncansLeg_12

DuncansLeg_13
(tail terminator)

DuncansLeg_14
(major tail protein)

DuncansLeg_15
(tail assembly chaperone)

DuncansLeg_16
(tail assembly chaperone)

DuncansLeg_17
(tape measure protein)

DuncansLeg_18
(minor tail protein)

DuncansLeg_19
(minor tail protein)

DuncansLeg_20

DuncansLeg_21
(minor tail protein)

DuncansLeg_22
(minor tail protein)

DuncansLeg_23

DuncansLeg_24

DuncansLeg_25

DuncansLeg_26
(lysin A)

DuncansLeg_27
(holin)

DuncansLeg_28
(lysin B)

DuncansLeg_29

DuncansLeg_30

DuncansLeg_31
(NrdH-like glutaredoxin)

DuncansLeg_32

DuncansLeg_33
(nucleotidyltransferase)

DuncansLeg_34
(Lsr2-like DNA bridging protein)

DuncansLeg_35

DuncansLeg_36
(tyrosine integrase)

DuncansLeg_37

DuncansLeg_38
(immunity repressor)

DuncansLeg_39
(Cro protein)

DuncansLeg_40
(excise)

DuncansLeg_41

DuncansLeg_42

DuncansLeg_43

DuncansLeg_44
(esterase)

DuncansLeg_45

DuncansLeg_46

DuncansLeg_47

DuncansLeg_48
(band-7-like membrane protein)

DuncansLeg_49 — tRNA
(tRNA-Tyr(gta))

DuncansLeg_50

DuncansLeg_51

DuncansLeg_52

DuncansLeg_53

DuncansLeg_54

DuncansLeg_55
(Ro-like RNA binding protein)

DuncansLeg_56

DuncansLeg_57

DuncansLeg_58

DuncansLeg_59

DuncansLeg_60

DuncansLeg_61
(Cas4 family exonuclease)

DuncansLeg_62
(ERF family ssDNA binding protein)

DuncansLeg_63

DuncansLeg_64
(ParB-like nuclease domain protein)

DuncansLeg_65

DuncansLeg_66
(HNH endonuclease)

DuncansLeg_67

DuncansLeg_68

DuncansLeg_69
(DnaB-like dsDNA helicase)

DuncansLeg_70
(WhiB family transcription factor)

DuncansLeg_71

DuncansLeg_72

DuncansLeg_73

DuncansLeg_74
(phosphoribosyl pyrophosphate transferase)

DuncansLeg_75
(nicotinate ribosyltransferase)

DuncansLeg_76
(polynucleotide kinase)

DuncansLeg_77

DuncansLeg_78
(RusA-like resolvase)

DuncansLeg_79
(WhiB family transcription factor)

DuncansLeg_80
(WhiB family transcription factor)

DuncansLeg_81

DuncansLeg_82

DuncansLeg_83

DuncansLeg_84
(ssDNA binding protein)

DuncansLeg_85
(HicA-like toxin)

DuncansLeg_86
(RNA ligase)

DuncansLeg_87
(ClpP-like protease)

DuncansLeg_88

DuncansLeg_89

DuncansLeg_90

DuncansLeg_91
(helix-turn-helix DNA binding domain protein)

DuncansLeg_92
(HNH endonuclease)

DuncansLeg_93

DuncansLeg_94

DuncansLeg_95
(DnaQ-like DNA polymerase III subunit)

DuncansLeg_96

DuncansLeg_97

DuncansLeg_98

DuncansLeg_99

DuncansLeg_100

DuncansLeg_101

DuncansLeg_102

DuncansLeg_103

DuncansLeg_104

DuncansLeg_105 — tRNA
(tRNA-Thr(cgt))

DuncansLeg_106

DuncansLeg_107 — tRNA
(tRNA-Pro(tgg))

DuncansLeg_108

DuncansLeg_109 — tRNA
(tRNA-Trp(cca))

DuncansLeg_110 — tRNA
(tRNA-Leu(tag))

DuncansLeg_111 — tRNA
(tRNA-His(gtg))

DuncansLeg_112

DuncansLeg_113 — tRNA
(tRNA-Gln(ctg))

DuncansLeg_114 — tRNA
(tRNA-Lys(ctt))

DuncansLeg_115

DuncansLeg_116

DuncansLeg_117 — tRNA
(tRNA-Asn(gtt))

DuncansLeg_118 — tRNA
(tRNA-Lys(ttt))

DuncansLeg_119

DuncansLeg_120

DuncansLeg_121

DuncansLeg_122

DuncansLeg_123

DuncansLeg_124

DuncansLeg_125

DuncansLeg_126

DuncansLeg_127

DuncansLeg_128

DuncansLeg_129

DuncansLeg_130

DuncansLeg_131

DuncansLeg_132

DuncansLeg_133
(AAA-ATPase)

DuncansLeg_134

DuncansLeg_135

DuncansLeg_136

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON755181
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 135
Pitt Freezer Box Grid# H1
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload