Detailed Information for Phage FroggyToad |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Grant West, Jason Simmons, Jae Kim, Erin Sullivan |
Year Found | 2024 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 24°C |
GPS Coordinates | 40.4334 N, 79.95668 W Map |
Discovery Notes | Patchy, barren yard |
Naming Notes | Frog and Toad! |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 2, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2613 |
Genome length (bp) | 46692 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | TACCAGGGGGA |
GC Content | 66.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CZ |
Subcluster | CZ2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | ~1mm, clear, round |
Morphotype | Siphoviridae |
Has been Phamerated? | No |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |