Detailed Information for Phage Lolly9 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Londiwe Ntshalintshali |
Year Found | 2013 |
Location Found | Durban, South Africa |
Finding Institution | University of Kwazulu-Natal |
Program | Mycobacterial Genetics Course, Durban, South Africa |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 29.867400 S, 30.981200 E Map |
Discovery Notes | grassy area of parking lot with compost.after two days of enrichment,first round purification and the titre is 4x1014 pfu/ml |
Naming Notes | after my nickname lolly and 9 is for my birth day |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 8, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 525 |
Genome length (bp) | 75816 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCGATCAGCC |
GC Content | 59.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | L |
Subcluster | L3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | small clear and circular plaques |
Morphotype | Siphoviridae |
Number of Genes | 130 |
Number of tRNAs | 11 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KT281791 |
Refseq Number | NC_028843 |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |