Gordonia phage Nymphadora
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Detailed Information for Phage Nymphadora
Discovery Information
Isolation HostGordonia terrae 3612
Duplicates of this PhageMalvern, Nymeria, Tiff5
Found ByAnastasia Pfeiffer
Year Found2015
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.444800 N, 79.952700 W Map
Mutants
Mutants of this Phage

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Nymphadora_1C

Nymphadora_2C

Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 12, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage650
Genome length (bp)53431
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGCTGGGGA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Number of Genes84
Has been Phamerated?Yes
Gene List

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Nymphadora_1
(terminase small subunit)

Nymphadora_2
(terminase large subunit)

Nymphadora_3

Nymphadora_4
(portal protein)

Nymphadora_5
(capsid maturation protease)

Nymphadora_6
(major capsid protein)

Nymphadora_7

Nymphadora_8
(head-to-tail connector protein)

Nymphadora_9
(head-to-tail stopper)

Nymphadora_10

Nymphadora_11
(tail terminator)

Nymphadora_12
(major tail protein)

Nymphadora_13

Nymphadora_14

Nymphadora_15

Nymphadora_16

Nymphadora_17
(tape measure protein)

Nymphadora_18
(minor tail protein)

Nymphadora_19
(minor tail protein)

Nymphadora_20
(lysin A)

Nymphadora_21
(lysin A, glycosyl hydrolase domain)

Nymphadora_22

Nymphadora_23

Nymphadora_24

Nymphadora_25
(lysin B)

Nymphadora_26
(minor tail protein)

Nymphadora_27

Nymphadora_28
(minor tail protein)

Nymphadora_29

Nymphadora_30

Nymphadora_31

Nymphadora_32

Nymphadora_33

Nymphadora_34

Nymphadora_35

Nymphadora_36

Nymphadora_37

Nymphadora_38

Nymphadora_39
(integrase)

Nymphadora_40

Nymphadora_41

Nymphadora_42

Nymphadora_43

Nymphadora_44
(immunity repressor)

Nymphadora_45
(helix-turn-helix DNA binding domain protein)

Nymphadora_46

Nymphadora_47

Nymphadora_48

Nymphadora_49

Nymphadora_50

Nymphadora_51

Nymphadora_52

Nymphadora_53

Nymphadora_54

Nymphadora_55

Nymphadora_56

Nymphadora_57

Nymphadora_58

Nymphadora_59
(RecE-like exonuclease)

Nymphadora_60
(RecT-like ssDNA binding protein)

Nymphadora_61

Nymphadora_62

Nymphadora_63
(DnaJ-like chaperonin)

Nymphadora_64

Nymphadora_65

Nymphadora_66
(DNA methylase)

Nymphadora_67
(methyltransferase)

Nymphadora_68

Nymphadora_69

Nymphadora_70

Nymphadora_71

Nymphadora_72

Nymphadora_73

Nymphadora_74

Nymphadora_75
(RusA-like resolvase)

Nymphadora_76

Nymphadora_77

Nymphadora_78

Nymphadora_79

Nymphadora_80

Nymphadora_81

Nymphadora_82

Nymphadora_83

Nymphadora_84
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKU963255
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 2
Pitt Freezer Box Grid# G11
Available Files
Plaque PictureDownload
Final DNAMaster FileDownload