Gordonia phage Oregano
Oregano Plaque Picture
Oregano EM Picture
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Detailed Information for Phage Oregano
Discovery Information
Isolation HostGordonia terrae 3612
Found ByHannah Lembree, Annika Savage
Year Found2021
Location FoundOrono, ME United States
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates44.915628 N, 68.69072 W Map
Discovery NotesSoil was collected from the master garden on Roger's Farm.
Naming NotesThis was named after our favorite spice.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 7, 2022
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1033
Genome length (bp)47575
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTGCCAAGGGGA
GC Content66.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ4
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
Plaque NotesPlaques are very turbid and have a diameter of 0.1 cm.
Number of Genes79
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Oregano_1
(terminase small subunit)

Oregano_2
(terminase large subunit)

Oregano_3

Oregano_4
(portal protein)

Oregano_5
(capsid maturation protease)

Oregano_6
(scaffolding protein)

Oregano_7
(major capsid protein)

Oregano_8

Oregano_9
(head-to-tail adaptor)

Oregano_10
(head-to-tail stopper)

Oregano_11

Oregano_12
(tail terminator)

Oregano_13
(major tail protein)

Oregano_14

Oregano_15
(tail assembly chaperone)

Oregano_16
(tail assembly chaperone)

Oregano_17

Oregano_18
(tape measure protein)

Oregano_19
(minor tail protein)

Oregano_20
(minor tail protein)

Oregano_21
(lysin A)

Oregano_22

Oregano_23

Oregano_24

Oregano_25
(lysin B)

Oregano_26
(minor tail protein)

Oregano_27

Oregano_28
(minor tail protein)

Oregano_29

Oregano_30

Oregano_31

Oregano_32
(DNA binding protein)

Oregano_33

Oregano_34

Oregano_35

Oregano_36

Oregano_37
(tyrosine integrase)

Oregano_38

Oregano_39
(tyrosine integrase)

Oregano_40
(helix-turn-helix DNA binding domain protein)

Oregano_41
(helix-turn-helix DNA binding domain protein)

Oregano_42
(toxin)

Oregano_43
(antitoxin)

Oregano_44
(immunity repressor)

Oregano_45
(Cro protein)

Oregano_46

Oregano_47

Oregano_48
(antirepressor)

Oregano_49

Oregano_50
(excise)

Oregano_51

Oregano_52

Oregano_53

Oregano_54

Oregano_55
(DnaQ-like DNA polymerase III subunit)

Oregano_56

Oregano_57
(Cas4 family exonuclease)

Oregano_58
(RecT-like ssDNA binding protein)

Oregano_59

Oregano_60

Oregano_61

Oregano_62

Oregano_63

Oregano_64

Oregano_65
(helix-turn-helix DNA binding domain protein)

Oregano_66

Oregano_67

Oregano_68
(RepA-like replication initiator)

Oregano_69

Oregano_70
(RusA-like resolvase)

Oregano_71

Oregano_72

Oregano_73

Oregano_74
(MerR-like helix-turn-helix DNA binding domain protein)

Oregano_75

Oregano_76

Oregano_77

Oregano_78

Oregano_79
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON456355
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 142
Pitt Freezer Box Grid# D9
Available Files
GenBank File for PhameratorDownload