| Detailed Information for Phage PantheRoc |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Former names | Spongebob |
| Found By | H. Watts, S. Haymond, A. Suleyman, L. Luo |
| Year Found | 2022 |
| Location Found | Pittsburgh, PA United States of America |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.444478 N, 79.955082 W Map |
| Discovery Notes | We ended up adopting this phage, but the person who discovered this found it on the backside of the Cathedral soil. |
| Naming Notes | We have a passion for Pittsburgh, and whenever we came to Pitt we sought for a symbol of our new school and home. Panther Roc (PantheRoc) all in one word, symbolizes our school as the mascot and attends every event. What better name to represent Pitt main campus then by honoring PantheRoc? |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 5, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 887 |
| Genome length (bp) | 53541 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TGCCAGGGGGA |
| GC Content | 66.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | CZ |
| Subcluster | CZ3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Our plaque has the turbid/hazy bullseye appearance with a larger size in diameter at around 3.5 mm in size. |
| Morphotype | Siphoviridae |
| Number of Genes | 87 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ184835 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
6.6x10^9 |
| Pitt Freezer Box# |
159 |
| Pitt Freezer Box Grid# |
G7 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| GenBank File for Phamerator | Download |
