Mycobacterium phage BadStone
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Detailed Information for Phage BadStone
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found BySeiji Shaw
Year Found2018
Location FoundProvidence, RI USA
Finding InstitutionBrown University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature17°C
GPS Coordinates41.832034 N, 71.38012 W Map
Discovery NotesSample found in the entrance of Blackstone Park, near fence post bordering a community garden. The soil was moist with morning dew, under woodchips, dry leaves, moss, and weeds.
Naming NotesThis phage was one of two found from this soil sample. This phage had inconclusive enzyme digest results and was deemed much more interesting than his relatively unambiguous brother. Hence, this phage was named BadStone.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 30, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage916
Genome length (bp)75679
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Houston-Downtown
Annotation StatusBeing Annotated (Expected completion by 12/15/2019)
Plaque NotesPlaques are small, circular, and turbid in nature, ranging typically from 1-3mm.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

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Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload