Mycobacterium phage Holt
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Detailed Information for Phage Holt
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMorgan Holt
Year Found2016
Location FoundBowling Green, KY USA
Finding InstitutionWestern Kentucky University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates36.93262 N, 86.40674 W Map
Discovery NotesThis soil came from a compost pile in Bowling Green, Ky. The compost pile was rich in nutrients (composed of leaves and debris). The soil was dark in color and moist, but not muddy. The sample was collected on September 15, 2016.
Naming NotesThis phage was named after its founder, Morgan Holt.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 6, 2023
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage198
Genome length (bp)75915
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionWestern Kentucky University
Annotation StatusBeing Annotated (Expected completion by 5/1/2023)
Plaque NotesThe plaques were very easy to see because they were clear and not turbid. The plaques were also easy to pick due to their medium size and visibility.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

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Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2016WEKUholtMH
SEA Lysate Titer 7.7 x 10^11 pfu/mL
Date of SEA Lysate Titering Nov 1, 2016
Pitt Freezer Box# 37
Pitt Freezer Box Grid# C6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload