Mycobacterium phage GooberAzure
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Detailed Information for Phage GooberAzure
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlexis Krech
Year Found2015
Location FoundSouth Portland, ME USA
Finding InstitutionSouthern Maine Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates43.641472 N, 70.240881 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 12, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage184
Genome length (bp)75129
Character of genome ends3' Sticky Overhang
Overhang Length9 bases
Overhang SequenceCGCTTGTCA
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterE
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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GooberAzure_1

GooberAzure_2

GooberAzure_3

GooberAzure_4

GooberAzure_5

GooberAzure_6
(terminase, small subunit)

GooberAzure_7

GooberAzure_8

GooberAzure_9

GooberAzure_10
(terminase, large subunit)

GooberAzure_11

GooberAzure_12
(portal protein)

GooberAzure_13
(capsid maturation protease)

GooberAzure_14
(major capsid protein)

GooberAzure_15

GooberAzure_16
(head-to-tail adaptor)

GooberAzure_17
(head-to-tail stopper)

GooberAzure_18

GooberAzure_19
(tail terminator)

GooberAzure_20
(major tail protein)

GooberAzure_21

GooberAzure_22
(tail assembly chaperone)

GooberAzure_23
(tail assembly chaperone)

GooberAzure_24
(tape measure protein)

GooberAzure_25
(minor tail protein)

GooberAzure_26
(minor tail protein)

GooberAzure_27
(minor tail protein)

GooberAzure_28
(minor tail protein)

GooberAzure_29
(minor tail protein, D-ala-D-ala carboxypeptidase)

GooberAzure_30

GooberAzure_31

GooberAzure_32
(helix-turn-helix DNA binding domain protein)

GooberAzure_33
(membrane protein)

GooberAzure_34
(lysin A)

GooberAzure_35
(holin)

GooberAzure_36

GooberAzure_37
(lysin B)

GooberAzure_38
(membrane protein)

GooberAzure_39
(NrdH-like glutaredoxin)

GooberAzure_40
(Lsr2-like DNA bridging protein)

GooberAzure_41

GooberAzure_42

GooberAzure_43

GooberAzure_44

GooberAzure_45

GooberAzure_46

GooberAzure_47

GooberAzure_48

GooberAzure_49

GooberAzure_50

GooberAzure_51

GooberAzure_52

GooberAzure_53

GooberAzure_54
(membrane protein)

GooberAzure_55
(tyrosine integrase)

GooberAzure_56

GooberAzure_57
(membrane protein)

GooberAzure_58
(immunity repressor)

GooberAzure_59

GooberAzure_60
(membrane protein)

GooberAzure_61
(pentapeptide repeat protein)

GooberAzure_62

GooberAzure_63

GooberAzure_64

GooberAzure_65

GooberAzure_66

GooberAzure_67

GooberAzure_68

GooberAzure_69

GooberAzure_70
(exonuclease)

GooberAzure_71

GooberAzure_72
(ssDNA binding protein, ERF family)

GooberAzure_73

GooberAzure_74

GooberAzure_75

GooberAzure_76

GooberAzure_77

GooberAzure_78

GooberAzure_79
(DprA-like DNA processing chain A)

GooberAzure_80
(HNH endonuclease)

GooberAzure_81

GooberAzure_82

GooberAzure_83

GooberAzure_84
(DnaB-like dsDNA helicase)

GooberAzure_85

GooberAzure_86
(WhiB family transcription factor)

GooberAzure_87

GooberAzure_88

GooberAzure_89
(Holliday junction resolvase)

GooberAzure_90
(membrane protein)

GooberAzure_91
(polynucleotide kinase)

GooberAzure_92

GooberAzure_93

GooberAzure_94
(RNA ligase)

GooberAzure_95
(helix-turn-helix DNA binding domain protein)

GooberAzure_96
(WhiB family transcription factor)

GooberAzure_97

GooberAzure_98

GooberAzure_99

GooberAzure_100

GooberAzure_101

GooberAzure_102
(endonuclease VII)

GooberAzure_103
(ssDNA binding protein)

GooberAzure_104
(ClpP-like protease)

GooberAzure_105

GooberAzure_106

GooberAzure_107

GooberAzure_108
(excise)

GooberAzure_109
(HNH endonuclease)

GooberAzure_112

GooberAzure_113

GooberAzure_114
(deoxycytidylate deaminase)

GooberAzure_115

GooberAzure_116
(DnaQ-like (DNA polymerase III subunit))

GooberAzure_117

GooberAzure_118
(RecA-like DNA recombinase)

GooberAzure_119

GooberAzure_120

GooberAzure_121

GooberAzure_122

GooberAzure_123

GooberAzure_124

GooberAzure_125

GooberAzure_126

GooberAzure_127

GooberAzure_128

GooberAzure_129
(helix-turn-helix DNA binding domain protein)

GooberAzure_130

GooberAzure_131

GooberAzure_132

GooberAzure_133

GooberAzure_134

GooberAzure_135

GooberAzure_136

GooberAzure_137

GooberAzure_138

GooberAzure_139

GooberAzure_140

GooberAzure_141

GooberAzure_142

GooberAzure_143

GooberAzure_144

GooberAzure_145

GooberAzure_146

GooberAzure_147

GooberAzure_148

GooberAzure_149
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN586037
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 18
Pitt Freezer Box Grid# F8
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload